demo + utils venv
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"""
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A sub-package for efficiently dealing with polynomials.
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Within the documentation for this sub-package, a "finite power series,"
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i.e., a polynomial (also referred to simply as a "series") is represented
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by a 1-D numpy array of the polynomial's coefficients, ordered from lowest
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order term to highest. For example, array([1,2,3]) represents
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``P_0 + 2*P_1 + 3*P_2``, where P_n is the n-th order basis polynomial
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applicable to the specific module in question, e.g., `polynomial` (which
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"wraps" the "standard" basis) or `chebyshev`. For optimal performance,
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all operations on polynomials, including evaluation at an argument, are
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implemented as operations on the coefficients. Additional (module-specific)
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information can be found in the docstring for the module of interest.
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"""
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from __future__ import division, absolute_import, print_function
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from .polynomial import Polynomial
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from .chebyshev import Chebyshev
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from .legendre import Legendre
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from .hermite import Hermite
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from .hermite_e import HermiteE
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from .laguerre import Laguerre
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from numpy._pytesttester import PytestTester
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test = PytestTester(__name__)
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del PytestTester
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"""
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Utility classes and functions for the polynomial modules.
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This module provides: error and warning objects; a polynomial base class;
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and some routines used in both the `polynomial` and `chebyshev` modules.
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Error objects
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-------------
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.. autosummary::
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:toctree: generated/
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PolyError base class for this sub-package's errors.
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PolyDomainError raised when domains are mismatched.
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Warning objects
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---------------
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.. autosummary::
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:toctree: generated/
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RankWarning raised in least-squares fit for rank-deficient matrix.
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Base class
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----------
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.. autosummary::
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:toctree: generated/
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PolyBase Obsolete base class for the polynomial classes. Do not use.
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Functions
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---------
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.. autosummary::
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:toctree: generated/
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as_series convert list of array_likes into 1-D arrays of common type.
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trimseq remove trailing zeros.
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trimcoef remove small trailing coefficients.
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getdomain return the domain appropriate for a given set of abscissae.
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mapdomain maps points between domains.
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mapparms parameters of the linear map between domains.
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"""
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from __future__ import division, absolute_import, print_function
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import numpy as np
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__all__ = [
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'RankWarning', 'PolyError', 'PolyDomainError', 'as_series', 'trimseq',
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'trimcoef', 'getdomain', 'mapdomain', 'mapparms', 'PolyBase']
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#
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# Warnings and Exceptions
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#
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class RankWarning(UserWarning):
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"""Issued by chebfit when the design matrix is rank deficient."""
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pass
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class PolyError(Exception):
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"""Base class for errors in this module."""
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pass
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class PolyDomainError(PolyError):
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"""Issued by the generic Poly class when two domains don't match.
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This is raised when an binary operation is passed Poly objects with
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different domains.
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"""
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pass
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#
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# Base class for all polynomial types
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#
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class PolyBase(object):
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"""
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Base class for all polynomial types.
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Deprecated in numpy 1.9.0, use the abstract
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ABCPolyBase class instead. Note that the latter
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requires a number of virtual functions to be
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implemented.
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"""
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pass
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#
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# Helper functions to convert inputs to 1-D arrays
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#
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def trimseq(seq):
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"""Remove small Poly series coefficients.
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Parameters
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----------
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seq : sequence
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Sequence of Poly series coefficients. This routine fails for
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empty sequences.
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Returns
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-------
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series : sequence
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Subsequence with trailing zeros removed. If the resulting sequence
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would be empty, return the first element. The returned sequence may
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or may not be a view.
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Notes
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-----
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Do not lose the type info if the sequence contains unknown objects.
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"""
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if len(seq) == 0:
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return seq
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else:
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for i in range(len(seq) - 1, -1, -1):
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if seq[i] != 0:
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break
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return seq[:i+1]
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def as_series(alist, trim=True):
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"""
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Return argument as a list of 1-d arrays.
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The returned list contains array(s) of dtype double, complex double, or
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object. A 1-d argument of shape ``(N,)`` is parsed into ``N`` arrays of
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size one; a 2-d argument of shape ``(M,N)`` is parsed into ``M`` arrays
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of size ``N`` (i.e., is "parsed by row"); and a higher dimensional array
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raises a Value Error if it is not first reshaped into either a 1-d or 2-d
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array.
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Parameters
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----------
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alist : array_like
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A 1- or 2-d array_like
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trim : boolean, optional
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When True, trailing zeros are removed from the inputs.
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When False, the inputs are passed through intact.
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Returns
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-------
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[a1, a2,...] : list of 1-D arrays
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A copy of the input data as a list of 1-d arrays.
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Raises
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------
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ValueError
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Raised when `as_series` cannot convert its input to 1-d arrays, or at
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least one of the resulting arrays is empty.
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Examples
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--------
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>>> from numpy.polynomial import polyutils as pu
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>>> a = np.arange(4)
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>>> pu.as_series(a)
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[array([ 0.]), array([ 1.]), array([ 2.]), array([ 3.])]
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>>> b = np.arange(6).reshape((2,3))
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>>> pu.as_series(b)
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[array([ 0., 1., 2.]), array([ 3., 4., 5.])]
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>>> pu.as_series((1, np.arange(3), np.arange(2, dtype=np.float16)))
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[array([ 1.]), array([ 0., 1., 2.]), array([ 0., 1.])]
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>>> pu.as_series([2, [1.1, 0.]])
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[array([ 2.]), array([ 1.1])]
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>>> pu.as_series([2, [1.1, 0.]], trim=False)
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[array([ 2.]), array([ 1.1, 0. ])]
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"""
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arrays = [np.array(a, ndmin=1, copy=0) for a in alist]
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if min([a.size for a in arrays]) == 0:
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raise ValueError("Coefficient array is empty")
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if any([a.ndim != 1 for a in arrays]):
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raise ValueError("Coefficient array is not 1-d")
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if trim:
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arrays = [trimseq(a) for a in arrays]
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if any([a.dtype == np.dtype(object) for a in arrays]):
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ret = []
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for a in arrays:
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if a.dtype != np.dtype(object):
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tmp = np.empty(len(a), dtype=np.dtype(object))
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tmp[:] = a[:]
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ret.append(tmp)
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else:
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ret.append(a.copy())
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else:
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try:
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dtype = np.common_type(*arrays)
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except Exception:
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raise ValueError("Coefficient arrays have no common type")
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ret = [np.array(a, copy=1, dtype=dtype) for a in arrays]
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return ret
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def trimcoef(c, tol=0):
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"""
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Remove "small" "trailing" coefficients from a polynomial.
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"Small" means "small in absolute value" and is controlled by the
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parameter `tol`; "trailing" means highest order coefficient(s), e.g., in
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``[0, 1, 1, 0, 0]`` (which represents ``0 + x + x**2 + 0*x**3 + 0*x**4``)
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both the 3-rd and 4-th order coefficients would be "trimmed."
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Parameters
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----------
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c : array_like
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1-d array of coefficients, ordered from lowest order to highest.
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tol : number, optional
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Trailing (i.e., highest order) elements with absolute value less
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than or equal to `tol` (default value is zero) are removed.
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Returns
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-------
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trimmed : ndarray
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1-d array with trailing zeros removed. If the resulting series
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would be empty, a series containing a single zero is returned.
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Raises
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------
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ValueError
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If `tol` < 0
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See Also
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--------
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trimseq
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Examples
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--------
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>>> from numpy.polynomial import polyutils as pu
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>>> pu.trimcoef((0,0,3,0,5,0,0))
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array([ 0., 0., 3., 0., 5.])
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>>> pu.trimcoef((0,0,1e-3,0,1e-5,0,0),1e-3) # item == tol is trimmed
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array([ 0.])
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>>> i = complex(0,1) # works for complex
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>>> pu.trimcoef((3e-4,1e-3*(1-i),5e-4,2e-5*(1+i)), 1e-3)
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array([ 0.0003+0.j , 0.0010-0.001j])
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"""
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if tol < 0:
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raise ValueError("tol must be non-negative")
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[c] = as_series([c])
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[ind] = np.nonzero(np.abs(c) > tol)
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if len(ind) == 0:
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return c[:1]*0
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else:
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return c[:ind[-1] + 1].copy()
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def getdomain(x):
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"""
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Return a domain suitable for given abscissae.
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Find a domain suitable for a polynomial or Chebyshev series
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defined at the values supplied.
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Parameters
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----------
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x : array_like
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1-d array of abscissae whose domain will be determined.
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Returns
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-------
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domain : ndarray
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1-d array containing two values. If the inputs are complex, then
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the two returned points are the lower left and upper right corners
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of the smallest rectangle (aligned with the axes) in the complex
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plane containing the points `x`. If the inputs are real, then the
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two points are the ends of the smallest interval containing the
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points `x`.
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See Also
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--------
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mapparms, mapdomain
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Examples
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--------
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>>> from numpy.polynomial import polyutils as pu
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>>> points = np.arange(4)**2 - 5; points
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array([-5, -4, -1, 4])
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>>> pu.getdomain(points)
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array([-5., 4.])
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>>> c = np.exp(complex(0,1)*np.pi*np.arange(12)/6) # unit circle
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>>> pu.getdomain(c)
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array([-1.-1.j, 1.+1.j])
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"""
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[x] = as_series([x], trim=False)
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if x.dtype.char in np.typecodes['Complex']:
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rmin, rmax = x.real.min(), x.real.max()
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imin, imax = x.imag.min(), x.imag.max()
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return np.array((complex(rmin, imin), complex(rmax, imax)))
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else:
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return np.array((x.min(), x.max()))
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def mapparms(old, new):
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"""
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Linear map parameters between domains.
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Return the parameters of the linear map ``offset + scale*x`` that maps
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`old` to `new` such that ``old[i] -> new[i]``, ``i = 0, 1``.
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Parameters
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----------
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old, new : array_like
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Domains. Each domain must (successfully) convert to a 1-d array
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containing precisely two values.
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Returns
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-------
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offset, scale : scalars
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The map ``L(x) = offset + scale*x`` maps the first domain to the
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second.
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See Also
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--------
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getdomain, mapdomain
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Notes
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-----
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Also works for complex numbers, and thus can be used to calculate the
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parameters required to map any line in the complex plane to any other
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line therein.
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Examples
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--------
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>>> from numpy.polynomial import polyutils as pu
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>>> pu.mapparms((-1,1),(-1,1))
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(0.0, 1.0)
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>>> pu.mapparms((1,-1),(-1,1))
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(0.0, -1.0)
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>>> i = complex(0,1)
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>>> pu.mapparms((-i,-1),(1,i))
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((1+1j), (1+0j))
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"""
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oldlen = old[1] - old[0]
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newlen = new[1] - new[0]
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off = (old[1]*new[0] - old[0]*new[1])/oldlen
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scl = newlen/oldlen
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return off, scl
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def mapdomain(x, old, new):
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"""
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Apply linear map to input points.
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The linear map ``offset + scale*x`` that maps the domain `old` to
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the domain `new` is applied to the points `x`.
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Parameters
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----------
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x : array_like
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Points to be mapped. If `x` is a subtype of ndarray the subtype
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will be preserved.
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old, new : array_like
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The two domains that determine the map. Each must (successfully)
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convert to 1-d arrays containing precisely two values.
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Returns
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-------
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x_out : ndarray
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Array of points of the same shape as `x`, after application of the
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linear map between the two domains.
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See Also
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--------
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getdomain, mapparms
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Notes
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-----
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Effectively, this implements:
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.. math ::
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x\\_out = new[0] + m(x - old[0])
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where
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.. math ::
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m = \\frac{new[1]-new[0]}{old[1]-old[0]}
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|
||||
Examples
|
||||
--------
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>>> from numpy.polynomial import polyutils as pu
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>>> old_domain = (-1,1)
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>>> new_domain = (0,2*np.pi)
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>>> x = np.linspace(-1,1,6); x
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array([-1. , -0.6, -0.2, 0.2, 0.6, 1. ])
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>>> x_out = pu.mapdomain(x, old_domain, new_domain); x_out
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array([ 0. , 1.25663706, 2.51327412, 3.76991118, 5.02654825,
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6.28318531])
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>>> x - pu.mapdomain(x_out, new_domain, old_domain)
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array([ 0., 0., 0., 0., 0., 0.])
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||||
|
||||
Also works for complex numbers (and thus can be used to map any line in
|
||||
the complex plane to any other line therein).
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||||
>>> i = complex(0,1)
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||||
>>> old = (-1 - i, 1 + i)
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||||
>>> new = (-1 + i, 1 - i)
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||||
>>> z = np.linspace(old[0], old[1], 6); z
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array([-1.0-1.j , -0.6-0.6j, -0.2-0.2j, 0.2+0.2j, 0.6+0.6j, 1.0+1.j ])
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||||
>>> new_z = P.mapdomain(z, old, new); new_z
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array([-1.0+1.j , -0.6+0.6j, -0.2+0.2j, 0.2-0.2j, 0.6-0.6j, 1.0-1.j ])
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||||
|
||||
"""
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||||
x = np.asanyarray(x)
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off, scl = mapparms(old, new)
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||||
return off + scl*x
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from __future__ import division, print_function
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def configuration(parent_package='',top_path=None):
|
||||
from numpy.distutils.misc_util import Configuration
|
||||
config = Configuration('polynomial', parent_package, top_path)
|
||||
config.add_data_dir('tests')
|
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return config
|
||||
|
||||
if __name__ == '__main__':
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from numpy.distutils.core import setup
|
||||
setup(configuration=configuration)
|
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"""Tests for chebyshev module.
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||||
|
||||
"""
|
||||
from __future__ import division, absolute_import, print_function
|
||||
|
||||
from functools import reduce
|
||||
|
||||
import numpy as np
|
||||
import numpy.polynomial.chebyshev as cheb
|
||||
from numpy.polynomial.polynomial import polyval
|
||||
from numpy.testing import (
|
||||
assert_almost_equal, assert_raises, assert_equal, assert_,
|
||||
)
|
||||
|
||||
|
||||
def trim(x):
|
||||
return cheb.chebtrim(x, tol=1e-6)
|
||||
|
||||
T0 = [1]
|
||||
T1 = [0, 1]
|
||||
T2 = [-1, 0, 2]
|
||||
T3 = [0, -3, 0, 4]
|
||||
T4 = [1, 0, -8, 0, 8]
|
||||
T5 = [0, 5, 0, -20, 0, 16]
|
||||
T6 = [-1, 0, 18, 0, -48, 0, 32]
|
||||
T7 = [0, -7, 0, 56, 0, -112, 0, 64]
|
||||
T8 = [1, 0, -32, 0, 160, 0, -256, 0, 128]
|
||||
T9 = [0, 9, 0, -120, 0, 432, 0, -576, 0, 256]
|
||||
|
||||
Tlist = [T0, T1, T2, T3, T4, T5, T6, T7, T8, T9]
|
||||
|
||||
|
||||
class TestPrivate(object):
|
||||
|
||||
def test__cseries_to_zseries(self):
|
||||
for i in range(5):
|
||||
inp = np.array([2] + [1]*i, np.double)
|
||||
tgt = np.array([.5]*i + [2] + [.5]*i, np.double)
|
||||
res = cheb._cseries_to_zseries(inp)
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test__zseries_to_cseries(self):
|
||||
for i in range(5):
|
||||
inp = np.array([.5]*i + [2] + [.5]*i, np.double)
|
||||
tgt = np.array([2] + [1]*i, np.double)
|
||||
res = cheb._zseries_to_cseries(inp)
|
||||
assert_equal(res, tgt)
|
||||
|
||||
|
||||
class TestConstants(object):
|
||||
|
||||
def test_chebdomain(self):
|
||||
assert_equal(cheb.chebdomain, [-1, 1])
|
||||
|
||||
def test_chebzero(self):
|
||||
assert_equal(cheb.chebzero, [0])
|
||||
|
||||
def test_chebone(self):
|
||||
assert_equal(cheb.chebone, [1])
|
||||
|
||||
def test_chebx(self):
|
||||
assert_equal(cheb.chebx, [0, 1])
|
||||
|
||||
|
||||
class TestArithmetic(object):
|
||||
|
||||
def test_chebadd(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] += 1
|
||||
res = cheb.chebadd([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_chebsub(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] -= 1
|
||||
res = cheb.chebsub([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_chebmulx(self):
|
||||
assert_equal(cheb.chebmulx([0]), [0])
|
||||
assert_equal(cheb.chebmulx([1]), [0, 1])
|
||||
for i in range(1, 5):
|
||||
ser = [0]*i + [1]
|
||||
tgt = [0]*(i - 1) + [.5, 0, .5]
|
||||
assert_equal(cheb.chebmulx(ser), tgt)
|
||||
|
||||
def test_chebmul(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(i + j + 1)
|
||||
tgt[i + j] += .5
|
||||
tgt[abs(i - j)] += .5
|
||||
res = cheb.chebmul([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_chebdiv(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
ci = [0]*i + [1]
|
||||
cj = [0]*j + [1]
|
||||
tgt = cheb.chebadd(ci, cj)
|
||||
quo, rem = cheb.chebdiv(tgt, ci)
|
||||
res = cheb.chebadd(cheb.chebmul(quo, ci), rem)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_chebpow(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
c = np.arange(i + 1)
|
||||
tgt = reduce(cheb.chebmul, [c]*j, np.array([1]))
|
||||
res = cheb.chebpow(c, j)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
|
||||
class TestEvaluation(object):
|
||||
# coefficients of 1 + 2*x + 3*x**2
|
||||
c1d = np.array([2.5, 2., 1.5])
|
||||
c2d = np.einsum('i,j->ij', c1d, c1d)
|
||||
c3d = np.einsum('i,j,k->ijk', c1d, c1d, c1d)
|
||||
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
y = polyval(x, [1., 2., 3.])
|
||||
|
||||
def test_chebval(self):
|
||||
#check empty input
|
||||
assert_equal(cheb.chebval([], [1]).size, 0)
|
||||
|
||||
#check normal input)
|
||||
x = np.linspace(-1, 1)
|
||||
y = [polyval(x, c) for c in Tlist]
|
||||
for i in range(10):
|
||||
msg = "At i=%d" % i
|
||||
tgt = y[i]
|
||||
res = cheb.chebval(x, [0]*i + [1])
|
||||
assert_almost_equal(res, tgt, err_msg=msg)
|
||||
|
||||
#check that shape is preserved
|
||||
for i in range(3):
|
||||
dims = [2]*i
|
||||
x = np.zeros(dims)
|
||||
assert_equal(cheb.chebval(x, [1]).shape, dims)
|
||||
assert_equal(cheb.chebval(x, [1, 0]).shape, dims)
|
||||
assert_equal(cheb.chebval(x, [1, 0, 0]).shape, dims)
|
||||
|
||||
def test_chebval2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, cheb.chebval2d, x1, x2[:2], self.c2d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2
|
||||
res = cheb.chebval2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = cheb.chebval2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_chebval3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, cheb.chebval3d, x1, x2, x3[:2], self.c3d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2*y3
|
||||
res = cheb.chebval3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = cheb.chebval3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_chebgrid2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j->ij', y1, y2)
|
||||
res = cheb.chebgrid2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = cheb.chebgrid2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3)*2)
|
||||
|
||||
def test_chebgrid3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j,k->ijk', y1, y2, y3)
|
||||
res = cheb.chebgrid3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = cheb.chebgrid3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3)*3)
|
||||
|
||||
|
||||
class TestIntegral(object):
|
||||
|
||||
def test_chebint(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, cheb.chebint, [0], .5)
|
||||
assert_raises(ValueError, cheb.chebint, [0], -1)
|
||||
assert_raises(ValueError, cheb.chebint, [0], 1, [0, 0])
|
||||
assert_raises(ValueError, cheb.chebint, [0], lbnd=[0])
|
||||
assert_raises(ValueError, cheb.chebint, [0], scl=[0])
|
||||
assert_raises(ValueError, cheb.chebint, [0], axis=.5)
|
||||
|
||||
# test integration of zero polynomial
|
||||
for i in range(2, 5):
|
||||
k = [0]*(i - 2) + [1]
|
||||
res = cheb.chebint([0], m=i, k=k)
|
||||
assert_almost_equal(res, [0, 1])
|
||||
|
||||
# check single integration with integration constant
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [1/scl]
|
||||
chebpol = cheb.poly2cheb(pol)
|
||||
chebint = cheb.chebint(chebpol, m=1, k=[i])
|
||||
res = cheb.cheb2poly(chebint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check single integration with integration constant and lbnd
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
chebpol = cheb.poly2cheb(pol)
|
||||
chebint = cheb.chebint(chebpol, m=1, k=[i], lbnd=-1)
|
||||
assert_almost_equal(cheb.chebval(-1, chebint), i)
|
||||
|
||||
# check single integration with integration constant and scaling
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [2/scl]
|
||||
chebpol = cheb.poly2cheb(pol)
|
||||
chebint = cheb.chebint(chebpol, m=1, k=[i], scl=2)
|
||||
res = cheb.cheb2poly(chebint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with default k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = cheb.chebint(tgt, m=1)
|
||||
res = cheb.chebint(pol, m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with defined k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = cheb.chebint(tgt, m=1, k=[k])
|
||||
res = cheb.chebint(pol, m=j, k=list(range(j)))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with lbnd
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = cheb.chebint(tgt, m=1, k=[k], lbnd=-1)
|
||||
res = cheb.chebint(pol, m=j, k=list(range(j)), lbnd=-1)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = cheb.chebint(tgt, m=1, k=[k], scl=2)
|
||||
res = cheb.chebint(pol, m=j, k=list(range(j)), scl=2)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_chebint_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([cheb.chebint(c) for c in c2d.T]).T
|
||||
res = cheb.chebint(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([cheb.chebint(c) for c in c2d])
|
||||
res = cheb.chebint(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([cheb.chebint(c, k=3) for c in c2d])
|
||||
res = cheb.chebint(c2d, k=3, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestDerivative(object):
|
||||
|
||||
def test_chebder(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, cheb.chebder, [0], .5)
|
||||
assert_raises(ValueError, cheb.chebder, [0], -1)
|
||||
|
||||
# check that zeroth derivative does nothing
|
||||
for i in range(5):
|
||||
tgt = [0]*i + [1]
|
||||
res = cheb.chebder(tgt, m=0)
|
||||
assert_equal(trim(res), trim(tgt))
|
||||
|
||||
# check that derivation is the inverse of integration
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = cheb.chebder(cheb.chebint(tgt, m=j), m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check derivation with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = cheb.chebder(cheb.chebint(tgt, m=j, scl=2), m=j, scl=.5)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_chebder_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([cheb.chebder(c) for c in c2d.T]).T
|
||||
res = cheb.chebder(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([cheb.chebder(c) for c in c2d])
|
||||
res = cheb.chebder(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestVander(object):
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
|
||||
def test_chebvander(self):
|
||||
# check for 1d x
|
||||
x = np.arange(3)
|
||||
v = cheb.chebvander(x, 3)
|
||||
assert_(v.shape == (3, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], cheb.chebval(x, coef))
|
||||
|
||||
# check for 2d x
|
||||
x = np.array([[1, 2], [3, 4], [5, 6]])
|
||||
v = cheb.chebvander(x, 3)
|
||||
assert_(v.shape == (3, 2, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], cheb.chebval(x, coef))
|
||||
|
||||
def test_chebvander2d(self):
|
||||
# also tests chebval2d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3))
|
||||
van = cheb.chebvander2d(x1, x2, [1, 2])
|
||||
tgt = cheb.chebval2d(x1, x2, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = cheb.chebvander2d([x1], [x2], [1, 2])
|
||||
assert_(van.shape == (1, 5, 6))
|
||||
|
||||
def test_chebvander3d(self):
|
||||
# also tests chebval3d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3, 4))
|
||||
van = cheb.chebvander3d(x1, x2, x3, [1, 2, 3])
|
||||
tgt = cheb.chebval3d(x1, x2, x3, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = cheb.chebvander3d([x1], [x2], [x3], [1, 2, 3])
|
||||
assert_(van.shape == (1, 5, 24))
|
||||
|
||||
|
||||
class TestFitting(object):
|
||||
|
||||
def test_chebfit(self):
|
||||
def f(x):
|
||||
return x*(x - 1)*(x - 2)
|
||||
|
||||
def f2(x):
|
||||
return x**4 + x**2 + 1
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, cheb.chebfit, [1], [1], -1)
|
||||
assert_raises(TypeError, cheb.chebfit, [[1]], [1], 0)
|
||||
assert_raises(TypeError, cheb.chebfit, [], [1], 0)
|
||||
assert_raises(TypeError, cheb.chebfit, [1], [[[1]]], 0)
|
||||
assert_raises(TypeError, cheb.chebfit, [1, 2], [1], 0)
|
||||
assert_raises(TypeError, cheb.chebfit, [1], [1, 2], 0)
|
||||
assert_raises(TypeError, cheb.chebfit, [1], [1], 0, w=[[1]])
|
||||
assert_raises(TypeError, cheb.chebfit, [1], [1], 0, w=[1, 1])
|
||||
assert_raises(ValueError, cheb.chebfit, [1], [1], [-1,])
|
||||
assert_raises(ValueError, cheb.chebfit, [1], [1], [2, -1, 6])
|
||||
assert_raises(TypeError, cheb.chebfit, [1], [1], [])
|
||||
|
||||
# Test fit
|
||||
x = np.linspace(0, 2)
|
||||
y = f(x)
|
||||
#
|
||||
coef3 = cheb.chebfit(x, y, 3)
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(cheb.chebval(x, coef3), y)
|
||||
coef3 = cheb.chebfit(x, y, [0, 1, 2, 3])
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(cheb.chebval(x, coef3), y)
|
||||
#
|
||||
coef4 = cheb.chebfit(x, y, 4)
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(cheb.chebval(x, coef4), y)
|
||||
coef4 = cheb.chebfit(x, y, [0, 1, 2, 3, 4])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(cheb.chebval(x, coef4), y)
|
||||
# check things still work if deg is not in strict increasing
|
||||
coef4 = cheb.chebfit(x, y, [2, 3, 4, 1, 0])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(cheb.chebval(x, coef4), y)
|
||||
#
|
||||
coef2d = cheb.chebfit(x, np.array([y, y]).T, 3)
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
coef2d = cheb.chebfit(x, np.array([y, y]).T, [0, 1, 2, 3])
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
# test weighting
|
||||
w = np.zeros_like(x)
|
||||
yw = y.copy()
|
||||
w[1::2] = 1
|
||||
y[0::2] = 0
|
||||
wcoef3 = cheb.chebfit(x, yw, 3, w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
wcoef3 = cheb.chebfit(x, yw, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
#
|
||||
wcoef2d = cheb.chebfit(x, np.array([yw, yw]).T, 3, w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
wcoef2d = cheb.chebfit(x, np.array([yw, yw]).T, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
# test scaling with complex values x points whose square
|
||||
# is zero when summed.
|
||||
x = [1, 1j, -1, -1j]
|
||||
assert_almost_equal(cheb.chebfit(x, x, 1), [0, 1])
|
||||
assert_almost_equal(cheb.chebfit(x, x, [0, 1]), [0, 1])
|
||||
# test fitting only even polynomials
|
||||
x = np.linspace(-1, 1)
|
||||
y = f2(x)
|
||||
coef1 = cheb.chebfit(x, y, 4)
|
||||
assert_almost_equal(cheb.chebval(x, coef1), y)
|
||||
coef2 = cheb.chebfit(x, y, [0, 2, 4])
|
||||
assert_almost_equal(cheb.chebval(x, coef2), y)
|
||||
assert_almost_equal(coef1, coef2)
|
||||
|
||||
|
||||
class TestInterpolate(object):
|
||||
|
||||
def f(self, x):
|
||||
return x * (x - 1) * (x - 2)
|
||||
|
||||
def test_raises(self):
|
||||
assert_raises(ValueError, cheb.chebinterpolate, self.f, -1)
|
||||
assert_raises(TypeError, cheb.chebinterpolate, self.f, 10.)
|
||||
|
||||
def test_dimensions(self):
|
||||
for deg in range(1, 5):
|
||||
assert_(cheb.chebinterpolate(self.f, deg).shape == (deg + 1,))
|
||||
|
||||
def test_approximation(self):
|
||||
|
||||
def powx(x, p):
|
||||
return x**p
|
||||
|
||||
x = np.linspace(-1, 1, 10)
|
||||
for deg in range(0, 10):
|
||||
for p in range(0, deg + 1):
|
||||
c = cheb.chebinterpolate(powx, deg, (p,))
|
||||
assert_almost_equal(cheb.chebval(x, c), powx(x, p), decimal=12)
|
||||
|
||||
|
||||
class TestCompanion(object):
|
||||
|
||||
def test_raises(self):
|
||||
assert_raises(ValueError, cheb.chebcompanion, [])
|
||||
assert_raises(ValueError, cheb.chebcompanion, [1])
|
||||
|
||||
def test_dimensions(self):
|
||||
for i in range(1, 5):
|
||||
coef = [0]*i + [1]
|
||||
assert_(cheb.chebcompanion(coef).shape == (i, i))
|
||||
|
||||
def test_linear_root(self):
|
||||
assert_(cheb.chebcompanion([1, 2])[0, 0] == -.5)
|
||||
|
||||
|
||||
class TestGauss(object):
|
||||
|
||||
def test_100(self):
|
||||
x, w = cheb.chebgauss(100)
|
||||
|
||||
# test orthogonality. Note that the results need to be normalized,
|
||||
# otherwise the huge values that can arise from fast growing
|
||||
# functions like Laguerre can be very confusing.
|
||||
v = cheb.chebvander(x, 99)
|
||||
vv = np.dot(v.T * w, v)
|
||||
vd = 1/np.sqrt(vv.diagonal())
|
||||
vv = vd[:, None] * vv * vd
|
||||
assert_almost_equal(vv, np.eye(100))
|
||||
|
||||
# check that the integral of 1 is correct
|
||||
tgt = np.pi
|
||||
assert_almost_equal(w.sum(), tgt)
|
||||
|
||||
|
||||
class TestMisc(object):
|
||||
|
||||
def test_chebfromroots(self):
|
||||
res = cheb.chebfromroots([])
|
||||
assert_almost_equal(trim(res), [1])
|
||||
for i in range(1, 5):
|
||||
roots = np.cos(np.linspace(-np.pi, 0, 2*i + 1)[1::2])
|
||||
tgt = [0]*i + [1]
|
||||
res = cheb.chebfromroots(roots)*2**(i-1)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_chebroots(self):
|
||||
assert_almost_equal(cheb.chebroots([1]), [])
|
||||
assert_almost_equal(cheb.chebroots([1, 2]), [-.5])
|
||||
for i in range(2, 5):
|
||||
tgt = np.linspace(-1, 1, i)
|
||||
res = cheb.chebroots(cheb.chebfromroots(tgt))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_chebtrim(self):
|
||||
coef = [2, -1, 1, 0]
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, cheb.chebtrim, coef, -1)
|
||||
|
||||
# Test results
|
||||
assert_equal(cheb.chebtrim(coef), coef[:-1])
|
||||
assert_equal(cheb.chebtrim(coef, 1), coef[:-3])
|
||||
assert_equal(cheb.chebtrim(coef, 2), [0])
|
||||
|
||||
def test_chebline(self):
|
||||
assert_equal(cheb.chebline(3, 4), [3, 4])
|
||||
|
||||
def test_cheb2poly(self):
|
||||
for i in range(10):
|
||||
assert_almost_equal(cheb.cheb2poly([0]*i + [1]), Tlist[i])
|
||||
|
||||
def test_poly2cheb(self):
|
||||
for i in range(10):
|
||||
assert_almost_equal(cheb.poly2cheb(Tlist[i]), [0]*i + [1])
|
||||
|
||||
def test_weight(self):
|
||||
x = np.linspace(-1, 1, 11)[1:-1]
|
||||
tgt = 1./(np.sqrt(1 + x) * np.sqrt(1 - x))
|
||||
res = cheb.chebweight(x)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
def test_chebpts1(self):
|
||||
#test exceptions
|
||||
assert_raises(ValueError, cheb.chebpts1, 1.5)
|
||||
assert_raises(ValueError, cheb.chebpts1, 0)
|
||||
|
||||
#test points
|
||||
tgt = [0]
|
||||
assert_almost_equal(cheb.chebpts1(1), tgt)
|
||||
tgt = [-0.70710678118654746, 0.70710678118654746]
|
||||
assert_almost_equal(cheb.chebpts1(2), tgt)
|
||||
tgt = [-0.86602540378443871, 0, 0.86602540378443871]
|
||||
assert_almost_equal(cheb.chebpts1(3), tgt)
|
||||
tgt = [-0.9238795325, -0.3826834323, 0.3826834323, 0.9238795325]
|
||||
assert_almost_equal(cheb.chebpts1(4), tgt)
|
||||
|
||||
def test_chebpts2(self):
|
||||
#test exceptions
|
||||
assert_raises(ValueError, cheb.chebpts2, 1.5)
|
||||
assert_raises(ValueError, cheb.chebpts2, 1)
|
||||
|
||||
#test points
|
||||
tgt = [-1, 1]
|
||||
assert_almost_equal(cheb.chebpts2(2), tgt)
|
||||
tgt = [-1, 0, 1]
|
||||
assert_almost_equal(cheb.chebpts2(3), tgt)
|
||||
tgt = [-1, -0.5, .5, 1]
|
||||
assert_almost_equal(cheb.chebpts2(4), tgt)
|
||||
tgt = [-1.0, -0.707106781187, 0, 0.707106781187, 1.0]
|
||||
assert_almost_equal(cheb.chebpts2(5), tgt)
|
||||
@@ -0,0 +1,642 @@
|
||||
"""Test inter-conversion of different polynomial classes.
|
||||
|
||||
This tests the convert and cast methods of all the polynomial classes.
|
||||
|
||||
"""
|
||||
from __future__ import division, absolute_import, print_function
|
||||
|
||||
import operator as op
|
||||
from numbers import Number
|
||||
|
||||
import pytest
|
||||
import numpy as np
|
||||
from numpy.polynomial import (
|
||||
Polynomial, Legendre, Chebyshev, Laguerre, Hermite, HermiteE)
|
||||
from numpy.testing import (
|
||||
assert_almost_equal, assert_raises, assert_equal, assert_,
|
||||
)
|
||||
from numpy.compat import long
|
||||
|
||||
|
||||
#
|
||||
# fixtures
|
||||
#
|
||||
|
||||
classes = (
|
||||
Polynomial, Legendre, Chebyshev, Laguerre,
|
||||
Hermite, HermiteE
|
||||
)
|
||||
classids = tuple(cls.__name__ for cls in classes)
|
||||
|
||||
@pytest.fixture(params=classes, ids=classids)
|
||||
def Poly(request):
|
||||
return request.param
|
||||
|
||||
#
|
||||
# helper functions
|
||||
#
|
||||
random = np.random.random
|
||||
|
||||
|
||||
def assert_poly_almost_equal(p1, p2, msg=""):
|
||||
try:
|
||||
assert_(np.all(p1.domain == p2.domain))
|
||||
assert_(np.all(p1.window == p2.window))
|
||||
assert_almost_equal(p1.coef, p2.coef)
|
||||
except AssertionError:
|
||||
msg = "Result: %s\nTarget: %s", (p1, p2)
|
||||
raise AssertionError(msg)
|
||||
|
||||
|
||||
#
|
||||
# Test conversion methods that depend on combinations of two classes.
|
||||
#
|
||||
|
||||
Poly1 = Poly
|
||||
Poly2 = Poly
|
||||
|
||||
|
||||
def test_conversion(Poly1, Poly2):
|
||||
x = np.linspace(0, 1, 10)
|
||||
coef = random((3,))
|
||||
|
||||
d1 = Poly1.domain + random((2,))*.25
|
||||
w1 = Poly1.window + random((2,))*.25
|
||||
p1 = Poly1(coef, domain=d1, window=w1)
|
||||
|
||||
d2 = Poly2.domain + random((2,))*.25
|
||||
w2 = Poly2.window + random((2,))*.25
|
||||
p2 = p1.convert(kind=Poly2, domain=d2, window=w2)
|
||||
|
||||
assert_almost_equal(p2.domain, d2)
|
||||
assert_almost_equal(p2.window, w2)
|
||||
assert_almost_equal(p2(x), p1(x))
|
||||
|
||||
|
||||
def test_cast(Poly1, Poly2):
|
||||
x = np.linspace(0, 1, 10)
|
||||
coef = random((3,))
|
||||
|
||||
d1 = Poly1.domain + random((2,))*.25
|
||||
w1 = Poly1.window + random((2,))*.25
|
||||
p1 = Poly1(coef, domain=d1, window=w1)
|
||||
|
||||
d2 = Poly2.domain + random((2,))*.25
|
||||
w2 = Poly2.window + random((2,))*.25
|
||||
p2 = Poly2.cast(p1, domain=d2, window=w2)
|
||||
|
||||
assert_almost_equal(p2.domain, d2)
|
||||
assert_almost_equal(p2.window, w2)
|
||||
assert_almost_equal(p2(x), p1(x))
|
||||
|
||||
|
||||
#
|
||||
# test methods that depend on one class
|
||||
#
|
||||
|
||||
|
||||
def test_identity(Poly):
|
||||
d = Poly.domain + random((2,))*.25
|
||||
w = Poly.window + random((2,))*.25
|
||||
x = np.linspace(d[0], d[1], 11)
|
||||
p = Poly.identity(domain=d, window=w)
|
||||
assert_equal(p.domain, d)
|
||||
assert_equal(p.window, w)
|
||||
assert_almost_equal(p(x), x)
|
||||
|
||||
|
||||
def test_basis(Poly):
|
||||
d = Poly.domain + random((2,))*.25
|
||||
w = Poly.window + random((2,))*.25
|
||||
p = Poly.basis(5, domain=d, window=w)
|
||||
assert_equal(p.domain, d)
|
||||
assert_equal(p.window, w)
|
||||
assert_equal(p.coef, [0]*5 + [1])
|
||||
|
||||
|
||||
def test_fromroots(Poly):
|
||||
# check that requested roots are zeros of a polynomial
|
||||
# of correct degree, domain, and window.
|
||||
d = Poly.domain + random((2,))*.25
|
||||
w = Poly.window + random((2,))*.25
|
||||
r = random((5,))
|
||||
p1 = Poly.fromroots(r, domain=d, window=w)
|
||||
assert_equal(p1.degree(), len(r))
|
||||
assert_equal(p1.domain, d)
|
||||
assert_equal(p1.window, w)
|
||||
assert_almost_equal(p1(r), 0)
|
||||
|
||||
# check that polynomial is monic
|
||||
pdom = Polynomial.domain
|
||||
pwin = Polynomial.window
|
||||
p2 = Polynomial.cast(p1, domain=pdom, window=pwin)
|
||||
assert_almost_equal(p2.coef[-1], 1)
|
||||
|
||||
|
||||
def test_fit(Poly):
|
||||
|
||||
def f(x):
|
||||
return x*(x - 1)*(x - 2)
|
||||
x = np.linspace(0, 3)
|
||||
y = f(x)
|
||||
|
||||
# check default value of domain and window
|
||||
p = Poly.fit(x, y, 3)
|
||||
assert_almost_equal(p.domain, [0, 3])
|
||||
assert_almost_equal(p(x), y)
|
||||
assert_equal(p.degree(), 3)
|
||||
|
||||
# check with given domains and window
|
||||
d = Poly.domain + random((2,))*.25
|
||||
w = Poly.window + random((2,))*.25
|
||||
p = Poly.fit(x, y, 3, domain=d, window=w)
|
||||
assert_almost_equal(p(x), y)
|
||||
assert_almost_equal(p.domain, d)
|
||||
assert_almost_equal(p.window, w)
|
||||
p = Poly.fit(x, y, [0, 1, 2, 3], domain=d, window=w)
|
||||
assert_almost_equal(p(x), y)
|
||||
assert_almost_equal(p.domain, d)
|
||||
assert_almost_equal(p.window, w)
|
||||
|
||||
# check with class domain default
|
||||
p = Poly.fit(x, y, 3, [])
|
||||
assert_equal(p.domain, Poly.domain)
|
||||
assert_equal(p.window, Poly.window)
|
||||
p = Poly.fit(x, y, [0, 1, 2, 3], [])
|
||||
assert_equal(p.domain, Poly.domain)
|
||||
assert_equal(p.window, Poly.window)
|
||||
|
||||
# check that fit accepts weights.
|
||||
w = np.zeros_like(x)
|
||||
z = y + random(y.shape)*.25
|
||||
w[::2] = 1
|
||||
p1 = Poly.fit(x[::2], z[::2], 3)
|
||||
p2 = Poly.fit(x, z, 3, w=w)
|
||||
p3 = Poly.fit(x, z, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(p1(x), p2(x))
|
||||
assert_almost_equal(p2(x), p3(x))
|
||||
|
||||
|
||||
def test_equal(Poly):
|
||||
p1 = Poly([1, 2, 3], domain=[0, 1], window=[2, 3])
|
||||
p2 = Poly([1, 1, 1], domain=[0, 1], window=[2, 3])
|
||||
p3 = Poly([1, 2, 3], domain=[1, 2], window=[2, 3])
|
||||
p4 = Poly([1, 2, 3], domain=[0, 1], window=[1, 2])
|
||||
assert_(p1 == p1)
|
||||
assert_(not p1 == p2)
|
||||
assert_(not p1 == p3)
|
||||
assert_(not p1 == p4)
|
||||
|
||||
|
||||
def test_not_equal(Poly):
|
||||
p1 = Poly([1, 2, 3], domain=[0, 1], window=[2, 3])
|
||||
p2 = Poly([1, 1, 1], domain=[0, 1], window=[2, 3])
|
||||
p3 = Poly([1, 2, 3], domain=[1, 2], window=[2, 3])
|
||||
p4 = Poly([1, 2, 3], domain=[0, 1], window=[1, 2])
|
||||
assert_(not p1 != p1)
|
||||
assert_(p1 != p2)
|
||||
assert_(p1 != p3)
|
||||
assert_(p1 != p4)
|
||||
|
||||
|
||||
def test_add(Poly):
|
||||
# This checks commutation, not numerical correctness
|
||||
c1 = list(random((4,)) + .5)
|
||||
c2 = list(random((3,)) + .5)
|
||||
p1 = Poly(c1)
|
||||
p2 = Poly(c2)
|
||||
p3 = p1 + p2
|
||||
assert_poly_almost_equal(p2 + p1, p3)
|
||||
assert_poly_almost_equal(p1 + c2, p3)
|
||||
assert_poly_almost_equal(c2 + p1, p3)
|
||||
assert_poly_almost_equal(p1 + tuple(c2), p3)
|
||||
assert_poly_almost_equal(tuple(c2) + p1, p3)
|
||||
assert_poly_almost_equal(p1 + np.array(c2), p3)
|
||||
assert_poly_almost_equal(np.array(c2) + p1, p3)
|
||||
assert_raises(TypeError, op.add, p1, Poly([0], domain=Poly.domain + 1))
|
||||
assert_raises(TypeError, op.add, p1, Poly([0], window=Poly.window + 1))
|
||||
if Poly is Polynomial:
|
||||
assert_raises(TypeError, op.add, p1, Chebyshev([0]))
|
||||
else:
|
||||
assert_raises(TypeError, op.add, p1, Polynomial([0]))
|
||||
|
||||
|
||||
def test_sub(Poly):
|
||||
# This checks commutation, not numerical correctness
|
||||
c1 = list(random((4,)) + .5)
|
||||
c2 = list(random((3,)) + .5)
|
||||
p1 = Poly(c1)
|
||||
p2 = Poly(c2)
|
||||
p3 = p1 - p2
|
||||
assert_poly_almost_equal(p2 - p1, -p3)
|
||||
assert_poly_almost_equal(p1 - c2, p3)
|
||||
assert_poly_almost_equal(c2 - p1, -p3)
|
||||
assert_poly_almost_equal(p1 - tuple(c2), p3)
|
||||
assert_poly_almost_equal(tuple(c2) - p1, -p3)
|
||||
assert_poly_almost_equal(p1 - np.array(c2), p3)
|
||||
assert_poly_almost_equal(np.array(c2) - p1, -p3)
|
||||
assert_raises(TypeError, op.sub, p1, Poly([0], domain=Poly.domain + 1))
|
||||
assert_raises(TypeError, op.sub, p1, Poly([0], window=Poly.window + 1))
|
||||
if Poly is Polynomial:
|
||||
assert_raises(TypeError, op.sub, p1, Chebyshev([0]))
|
||||
else:
|
||||
assert_raises(TypeError, op.sub, p1, Polynomial([0]))
|
||||
|
||||
|
||||
def test_mul(Poly):
|
||||
c1 = list(random((4,)) + .5)
|
||||
c2 = list(random((3,)) + .5)
|
||||
p1 = Poly(c1)
|
||||
p2 = Poly(c2)
|
||||
p3 = p1 * p2
|
||||
assert_poly_almost_equal(p2 * p1, p3)
|
||||
assert_poly_almost_equal(p1 * c2, p3)
|
||||
assert_poly_almost_equal(c2 * p1, p3)
|
||||
assert_poly_almost_equal(p1 * tuple(c2), p3)
|
||||
assert_poly_almost_equal(tuple(c2) * p1, p3)
|
||||
assert_poly_almost_equal(p1 * np.array(c2), p3)
|
||||
assert_poly_almost_equal(np.array(c2) * p1, p3)
|
||||
assert_poly_almost_equal(p1 * 2, p1 * Poly([2]))
|
||||
assert_poly_almost_equal(2 * p1, p1 * Poly([2]))
|
||||
assert_raises(TypeError, op.mul, p1, Poly([0], domain=Poly.domain + 1))
|
||||
assert_raises(TypeError, op.mul, p1, Poly([0], window=Poly.window + 1))
|
||||
if Poly is Polynomial:
|
||||
assert_raises(TypeError, op.mul, p1, Chebyshev([0]))
|
||||
else:
|
||||
assert_raises(TypeError, op.mul, p1, Polynomial([0]))
|
||||
|
||||
|
||||
def test_floordiv(Poly):
|
||||
c1 = list(random((4,)) + .5)
|
||||
c2 = list(random((3,)) + .5)
|
||||
c3 = list(random((2,)) + .5)
|
||||
p1 = Poly(c1)
|
||||
p2 = Poly(c2)
|
||||
p3 = Poly(c3)
|
||||
p4 = p1 * p2 + p3
|
||||
c4 = list(p4.coef)
|
||||
assert_poly_almost_equal(p4 // p2, p1)
|
||||
assert_poly_almost_equal(p4 // c2, p1)
|
||||
assert_poly_almost_equal(c4 // p2, p1)
|
||||
assert_poly_almost_equal(p4 // tuple(c2), p1)
|
||||
assert_poly_almost_equal(tuple(c4) // p2, p1)
|
||||
assert_poly_almost_equal(p4 // np.array(c2), p1)
|
||||
assert_poly_almost_equal(np.array(c4) // p2, p1)
|
||||
assert_poly_almost_equal(2 // p2, Poly([0]))
|
||||
assert_poly_almost_equal(p2 // 2, 0.5*p2)
|
||||
assert_raises(
|
||||
TypeError, op.floordiv, p1, Poly([0], domain=Poly.domain + 1))
|
||||
assert_raises(
|
||||
TypeError, op.floordiv, p1, Poly([0], window=Poly.window + 1))
|
||||
if Poly is Polynomial:
|
||||
assert_raises(TypeError, op.floordiv, p1, Chebyshev([0]))
|
||||
else:
|
||||
assert_raises(TypeError, op.floordiv, p1, Polynomial([0]))
|
||||
|
||||
|
||||
def test_truediv(Poly):
|
||||
# true division is valid only if the denominator is a Number and
|
||||
# not a python bool.
|
||||
p1 = Poly([1,2,3])
|
||||
p2 = p1 * 5
|
||||
|
||||
for stype in np.ScalarType:
|
||||
if not issubclass(stype, Number) or issubclass(stype, bool):
|
||||
continue
|
||||
s = stype(5)
|
||||
assert_poly_almost_equal(op.truediv(p2, s), p1)
|
||||
assert_raises(TypeError, op.truediv, s, p2)
|
||||
for stype in (int, long, float):
|
||||
s = stype(5)
|
||||
assert_poly_almost_equal(op.truediv(p2, s), p1)
|
||||
assert_raises(TypeError, op.truediv, s, p2)
|
||||
for stype in [complex]:
|
||||
s = stype(5, 0)
|
||||
assert_poly_almost_equal(op.truediv(p2, s), p1)
|
||||
assert_raises(TypeError, op.truediv, s, p2)
|
||||
for s in [tuple(), list(), dict(), bool(), np.array([1])]:
|
||||
assert_raises(TypeError, op.truediv, p2, s)
|
||||
assert_raises(TypeError, op.truediv, s, p2)
|
||||
for ptype in classes:
|
||||
assert_raises(TypeError, op.truediv, p2, ptype(1))
|
||||
|
||||
|
||||
def test_mod(Poly):
|
||||
# This checks commutation, not numerical correctness
|
||||
c1 = list(random((4,)) + .5)
|
||||
c2 = list(random((3,)) + .5)
|
||||
c3 = list(random((2,)) + .5)
|
||||
p1 = Poly(c1)
|
||||
p2 = Poly(c2)
|
||||
p3 = Poly(c3)
|
||||
p4 = p1 * p2 + p3
|
||||
c4 = list(p4.coef)
|
||||
assert_poly_almost_equal(p4 % p2, p3)
|
||||
assert_poly_almost_equal(p4 % c2, p3)
|
||||
assert_poly_almost_equal(c4 % p2, p3)
|
||||
assert_poly_almost_equal(p4 % tuple(c2), p3)
|
||||
assert_poly_almost_equal(tuple(c4) % p2, p3)
|
||||
assert_poly_almost_equal(p4 % np.array(c2), p3)
|
||||
assert_poly_almost_equal(np.array(c4) % p2, p3)
|
||||
assert_poly_almost_equal(2 % p2, Poly([2]))
|
||||
assert_poly_almost_equal(p2 % 2, Poly([0]))
|
||||
assert_raises(TypeError, op.mod, p1, Poly([0], domain=Poly.domain + 1))
|
||||
assert_raises(TypeError, op.mod, p1, Poly([0], window=Poly.window + 1))
|
||||
if Poly is Polynomial:
|
||||
assert_raises(TypeError, op.mod, p1, Chebyshev([0]))
|
||||
else:
|
||||
assert_raises(TypeError, op.mod, p1, Polynomial([0]))
|
||||
|
||||
|
||||
def test_divmod(Poly):
|
||||
# This checks commutation, not numerical correctness
|
||||
c1 = list(random((4,)) + .5)
|
||||
c2 = list(random((3,)) + .5)
|
||||
c3 = list(random((2,)) + .5)
|
||||
p1 = Poly(c1)
|
||||
p2 = Poly(c2)
|
||||
p3 = Poly(c3)
|
||||
p4 = p1 * p2 + p3
|
||||
c4 = list(p4.coef)
|
||||
quo, rem = divmod(p4, p2)
|
||||
assert_poly_almost_equal(quo, p1)
|
||||
assert_poly_almost_equal(rem, p3)
|
||||
quo, rem = divmod(p4, c2)
|
||||
assert_poly_almost_equal(quo, p1)
|
||||
assert_poly_almost_equal(rem, p3)
|
||||
quo, rem = divmod(c4, p2)
|
||||
assert_poly_almost_equal(quo, p1)
|
||||
assert_poly_almost_equal(rem, p3)
|
||||
quo, rem = divmod(p4, tuple(c2))
|
||||
assert_poly_almost_equal(quo, p1)
|
||||
assert_poly_almost_equal(rem, p3)
|
||||
quo, rem = divmod(tuple(c4), p2)
|
||||
assert_poly_almost_equal(quo, p1)
|
||||
assert_poly_almost_equal(rem, p3)
|
||||
quo, rem = divmod(p4, np.array(c2))
|
||||
assert_poly_almost_equal(quo, p1)
|
||||
assert_poly_almost_equal(rem, p3)
|
||||
quo, rem = divmod(np.array(c4), p2)
|
||||
assert_poly_almost_equal(quo, p1)
|
||||
assert_poly_almost_equal(rem, p3)
|
||||
quo, rem = divmod(p2, 2)
|
||||
assert_poly_almost_equal(quo, 0.5*p2)
|
||||
assert_poly_almost_equal(rem, Poly([0]))
|
||||
quo, rem = divmod(2, p2)
|
||||
assert_poly_almost_equal(quo, Poly([0]))
|
||||
assert_poly_almost_equal(rem, Poly([2]))
|
||||
assert_raises(TypeError, divmod, p1, Poly([0], domain=Poly.domain + 1))
|
||||
assert_raises(TypeError, divmod, p1, Poly([0], window=Poly.window + 1))
|
||||
if Poly is Polynomial:
|
||||
assert_raises(TypeError, divmod, p1, Chebyshev([0]))
|
||||
else:
|
||||
assert_raises(TypeError, divmod, p1, Polynomial([0]))
|
||||
|
||||
|
||||
def test_roots(Poly):
|
||||
d = Poly.domain * 1.25 + .25
|
||||
w = Poly.window
|
||||
tgt = np.linspace(d[0], d[1], 5)
|
||||
res = np.sort(Poly.fromroots(tgt, domain=d, window=w).roots())
|
||||
assert_almost_equal(res, tgt)
|
||||
# default domain and window
|
||||
res = np.sort(Poly.fromroots(tgt).roots())
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
def test_degree(Poly):
|
||||
p = Poly.basis(5)
|
||||
assert_equal(p.degree(), 5)
|
||||
|
||||
|
||||
def test_copy(Poly):
|
||||
p1 = Poly.basis(5)
|
||||
p2 = p1.copy()
|
||||
assert_(p1 == p2)
|
||||
assert_(p1 is not p2)
|
||||
assert_(p1.coef is not p2.coef)
|
||||
assert_(p1.domain is not p2.domain)
|
||||
assert_(p1.window is not p2.window)
|
||||
|
||||
|
||||
def test_integ(Poly):
|
||||
P = Polynomial
|
||||
# Check defaults
|
||||
p0 = Poly.cast(P([1*2, 2*3, 3*4]))
|
||||
p1 = P.cast(p0.integ())
|
||||
p2 = P.cast(p0.integ(2))
|
||||
assert_poly_almost_equal(p1, P([0, 2, 3, 4]))
|
||||
assert_poly_almost_equal(p2, P([0, 0, 1, 1, 1]))
|
||||
# Check with k
|
||||
p0 = Poly.cast(P([1*2, 2*3, 3*4]))
|
||||
p1 = P.cast(p0.integ(k=1))
|
||||
p2 = P.cast(p0.integ(2, k=[1, 1]))
|
||||
assert_poly_almost_equal(p1, P([1, 2, 3, 4]))
|
||||
assert_poly_almost_equal(p2, P([1, 1, 1, 1, 1]))
|
||||
# Check with lbnd
|
||||
p0 = Poly.cast(P([1*2, 2*3, 3*4]))
|
||||
p1 = P.cast(p0.integ(lbnd=1))
|
||||
p2 = P.cast(p0.integ(2, lbnd=1))
|
||||
assert_poly_almost_equal(p1, P([-9, 2, 3, 4]))
|
||||
assert_poly_almost_equal(p2, P([6, -9, 1, 1, 1]))
|
||||
# Check scaling
|
||||
d = 2*Poly.domain
|
||||
p0 = Poly.cast(P([1*2, 2*3, 3*4]), domain=d)
|
||||
p1 = P.cast(p0.integ())
|
||||
p2 = P.cast(p0.integ(2))
|
||||
assert_poly_almost_equal(p1, P([0, 2, 3, 4]))
|
||||
assert_poly_almost_equal(p2, P([0, 0, 1, 1, 1]))
|
||||
|
||||
|
||||
def test_deriv(Poly):
|
||||
# Check that the derivative is the inverse of integration. It is
|
||||
# assumes that the integration has been checked elsewhere.
|
||||
d = Poly.domain + random((2,))*.25
|
||||
w = Poly.window + random((2,))*.25
|
||||
p1 = Poly([1, 2, 3], domain=d, window=w)
|
||||
p2 = p1.integ(2, k=[1, 2])
|
||||
p3 = p1.integ(1, k=[1])
|
||||
assert_almost_equal(p2.deriv(1).coef, p3.coef)
|
||||
assert_almost_equal(p2.deriv(2).coef, p1.coef)
|
||||
# default domain and window
|
||||
p1 = Poly([1, 2, 3])
|
||||
p2 = p1.integ(2, k=[1, 2])
|
||||
p3 = p1.integ(1, k=[1])
|
||||
assert_almost_equal(p2.deriv(1).coef, p3.coef)
|
||||
assert_almost_equal(p2.deriv(2).coef, p1.coef)
|
||||
|
||||
|
||||
def test_linspace(Poly):
|
||||
d = Poly.domain + random((2,))*.25
|
||||
w = Poly.window + random((2,))*.25
|
||||
p = Poly([1, 2, 3], domain=d, window=w)
|
||||
# check default domain
|
||||
xtgt = np.linspace(d[0], d[1], 20)
|
||||
ytgt = p(xtgt)
|
||||
xres, yres = p.linspace(20)
|
||||
assert_almost_equal(xres, xtgt)
|
||||
assert_almost_equal(yres, ytgt)
|
||||
# check specified domain
|
||||
xtgt = np.linspace(0, 2, 20)
|
||||
ytgt = p(xtgt)
|
||||
xres, yres = p.linspace(20, domain=[0, 2])
|
||||
assert_almost_equal(xres, xtgt)
|
||||
assert_almost_equal(yres, ytgt)
|
||||
|
||||
|
||||
def test_pow(Poly):
|
||||
d = Poly.domain + random((2,))*.25
|
||||
w = Poly.window + random((2,))*.25
|
||||
tgt = Poly([1], domain=d, window=w)
|
||||
tst = Poly([1, 2, 3], domain=d, window=w)
|
||||
for i in range(5):
|
||||
assert_poly_almost_equal(tst**i, tgt)
|
||||
tgt = tgt * tst
|
||||
# default domain and window
|
||||
tgt = Poly([1])
|
||||
tst = Poly([1, 2, 3])
|
||||
for i in range(5):
|
||||
assert_poly_almost_equal(tst**i, tgt)
|
||||
tgt = tgt * tst
|
||||
# check error for invalid powers
|
||||
assert_raises(ValueError, op.pow, tgt, 1.5)
|
||||
assert_raises(ValueError, op.pow, tgt, -1)
|
||||
|
||||
|
||||
def test_call(Poly):
|
||||
P = Polynomial
|
||||
d = Poly.domain
|
||||
x = np.linspace(d[0], d[1], 11)
|
||||
|
||||
# Check defaults
|
||||
p = Poly.cast(P([1, 2, 3]))
|
||||
tgt = 1 + x*(2 + 3*x)
|
||||
res = p(x)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
def test_cutdeg(Poly):
|
||||
p = Poly([1, 2, 3])
|
||||
assert_raises(ValueError, p.cutdeg, .5)
|
||||
assert_raises(ValueError, p.cutdeg, -1)
|
||||
assert_equal(len(p.cutdeg(3)), 3)
|
||||
assert_equal(len(p.cutdeg(2)), 3)
|
||||
assert_equal(len(p.cutdeg(1)), 2)
|
||||
assert_equal(len(p.cutdeg(0)), 1)
|
||||
|
||||
|
||||
def test_truncate(Poly):
|
||||
p = Poly([1, 2, 3])
|
||||
assert_raises(ValueError, p.truncate, .5)
|
||||
assert_raises(ValueError, p.truncate, 0)
|
||||
assert_equal(len(p.truncate(4)), 3)
|
||||
assert_equal(len(p.truncate(3)), 3)
|
||||
assert_equal(len(p.truncate(2)), 2)
|
||||
assert_equal(len(p.truncate(1)), 1)
|
||||
|
||||
|
||||
def test_trim(Poly):
|
||||
c = [1, 1e-6, 1e-12, 0]
|
||||
p = Poly(c)
|
||||
assert_equal(p.trim().coef, c[:3])
|
||||
assert_equal(p.trim(1e-10).coef, c[:2])
|
||||
assert_equal(p.trim(1e-5).coef, c[:1])
|
||||
|
||||
|
||||
def test_mapparms(Poly):
|
||||
# check with defaults. Should be identity.
|
||||
d = Poly.domain
|
||||
w = Poly.window
|
||||
p = Poly([1], domain=d, window=w)
|
||||
assert_almost_equal([0, 1], p.mapparms())
|
||||
#
|
||||
w = 2*d + 1
|
||||
p = Poly([1], domain=d, window=w)
|
||||
assert_almost_equal([1, 2], p.mapparms())
|
||||
|
||||
|
||||
def test_ufunc_override(Poly):
|
||||
p = Poly([1, 2, 3])
|
||||
x = np.ones(3)
|
||||
assert_raises(TypeError, np.add, p, x)
|
||||
assert_raises(TypeError, np.add, x, p)
|
||||
|
||||
|
||||
|
||||
class TestLatexRepr(object):
|
||||
"""Test the latex repr used by ipython """
|
||||
|
||||
def as_latex(self, obj):
|
||||
# right now we ignore the formatting of scalars in our tests, since
|
||||
# it makes them too verbose. Ideally, the formatting of scalars will
|
||||
# be fixed such that tests below continue to pass
|
||||
obj._repr_latex_scalar = lambda x: str(x)
|
||||
try:
|
||||
return obj._repr_latex_()
|
||||
finally:
|
||||
del obj._repr_latex_scalar
|
||||
|
||||
def test_simple_polynomial(self):
|
||||
# default input
|
||||
p = Polynomial([1, 2, 3])
|
||||
assert_equal(self.as_latex(p),
|
||||
r'$x \mapsto 1.0 + 2.0\,x + 3.0\,x^{2}$')
|
||||
|
||||
# translated input
|
||||
p = Polynomial([1, 2, 3], domain=[-2, 0])
|
||||
assert_equal(self.as_latex(p),
|
||||
r'$x \mapsto 1.0 + 2.0\,\left(1.0 + x\right) + 3.0\,\left(1.0 + x\right)^{2}$')
|
||||
|
||||
# scaled input
|
||||
p = Polynomial([1, 2, 3], domain=[-0.5, 0.5])
|
||||
assert_equal(self.as_latex(p),
|
||||
r'$x \mapsto 1.0 + 2.0\,\left(2.0x\right) + 3.0\,\left(2.0x\right)^{2}$')
|
||||
|
||||
# affine input
|
||||
p = Polynomial([1, 2, 3], domain=[-1, 0])
|
||||
assert_equal(self.as_latex(p),
|
||||
r'$x \mapsto 1.0 + 2.0\,\left(1.0 + 2.0x\right) + 3.0\,\left(1.0 + 2.0x\right)^{2}$')
|
||||
|
||||
def test_basis_func(self):
|
||||
p = Chebyshev([1, 2, 3])
|
||||
assert_equal(self.as_latex(p),
|
||||
r'$x \mapsto 1.0\,{T}_{0}(x) + 2.0\,{T}_{1}(x) + 3.0\,{T}_{2}(x)$')
|
||||
# affine input - check no surplus parens are added
|
||||
p = Chebyshev([1, 2, 3], domain=[-1, 0])
|
||||
assert_equal(self.as_latex(p),
|
||||
r'$x \mapsto 1.0\,{T}_{0}(1.0 + 2.0x) + 2.0\,{T}_{1}(1.0 + 2.0x) + 3.0\,{T}_{2}(1.0 + 2.0x)$')
|
||||
|
||||
def test_multichar_basis_func(self):
|
||||
p = HermiteE([1, 2, 3])
|
||||
assert_equal(self.as_latex(p),
|
||||
r'$x \mapsto 1.0\,{He}_{0}(x) + 2.0\,{He}_{1}(x) + 3.0\,{He}_{2}(x)$')
|
||||
|
||||
|
||||
#
|
||||
# Test class method that only exists for some classes
|
||||
#
|
||||
|
||||
|
||||
class TestInterpolate(object):
|
||||
|
||||
def f(self, x):
|
||||
return x * (x - 1) * (x - 2)
|
||||
|
||||
def test_raises(self):
|
||||
assert_raises(ValueError, Chebyshev.interpolate, self.f, -1)
|
||||
assert_raises(TypeError, Chebyshev.interpolate, self.f, 10.)
|
||||
|
||||
def test_dimensions(self):
|
||||
for deg in range(1, 5):
|
||||
assert_(Chebyshev.interpolate(self.f, deg).degree() == deg)
|
||||
|
||||
def test_approximation(self):
|
||||
|
||||
def powx(x, p):
|
||||
return x**p
|
||||
|
||||
x = np.linspace(0, 2, 10)
|
||||
for deg in range(0, 10):
|
||||
for t in range(0, deg + 1):
|
||||
p = Chebyshev.interpolate(powx, deg, domain=[0, 2], args=(t,))
|
||||
assert_almost_equal(p(x), powx(x, t), decimal=12)
|
||||
@@ -0,0 +1,557 @@
|
||||
"""Tests for hermite module.
|
||||
|
||||
"""
|
||||
from __future__ import division, absolute_import, print_function
|
||||
|
||||
from functools import reduce
|
||||
|
||||
import numpy as np
|
||||
import numpy.polynomial.hermite as herm
|
||||
from numpy.polynomial.polynomial import polyval
|
||||
from numpy.testing import (
|
||||
assert_almost_equal, assert_raises, assert_equal, assert_,
|
||||
)
|
||||
|
||||
H0 = np.array([1])
|
||||
H1 = np.array([0, 2])
|
||||
H2 = np.array([-2, 0, 4])
|
||||
H3 = np.array([0, -12, 0, 8])
|
||||
H4 = np.array([12, 0, -48, 0, 16])
|
||||
H5 = np.array([0, 120, 0, -160, 0, 32])
|
||||
H6 = np.array([-120, 0, 720, 0, -480, 0, 64])
|
||||
H7 = np.array([0, -1680, 0, 3360, 0, -1344, 0, 128])
|
||||
H8 = np.array([1680, 0, -13440, 0, 13440, 0, -3584, 0, 256])
|
||||
H9 = np.array([0, 30240, 0, -80640, 0, 48384, 0, -9216, 0, 512])
|
||||
|
||||
Hlist = [H0, H1, H2, H3, H4, H5, H6, H7, H8, H9]
|
||||
|
||||
|
||||
def trim(x):
|
||||
return herm.hermtrim(x, tol=1e-6)
|
||||
|
||||
|
||||
class TestConstants(object):
|
||||
|
||||
def test_hermdomain(self):
|
||||
assert_equal(herm.hermdomain, [-1, 1])
|
||||
|
||||
def test_hermzero(self):
|
||||
assert_equal(herm.hermzero, [0])
|
||||
|
||||
def test_hermone(self):
|
||||
assert_equal(herm.hermone, [1])
|
||||
|
||||
def test_hermx(self):
|
||||
assert_equal(herm.hermx, [0, .5])
|
||||
|
||||
|
||||
class TestArithmetic(object):
|
||||
x = np.linspace(-3, 3, 100)
|
||||
|
||||
def test_hermadd(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] += 1
|
||||
res = herm.hermadd([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_hermsub(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] -= 1
|
||||
res = herm.hermsub([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_hermmulx(self):
|
||||
assert_equal(herm.hermmulx([0]), [0])
|
||||
assert_equal(herm.hermmulx([1]), [0, .5])
|
||||
for i in range(1, 5):
|
||||
ser = [0]*i + [1]
|
||||
tgt = [0]*(i - 1) + [i, 0, .5]
|
||||
assert_equal(herm.hermmulx(ser), tgt)
|
||||
|
||||
def test_hermmul(self):
|
||||
# check values of result
|
||||
for i in range(5):
|
||||
pol1 = [0]*i + [1]
|
||||
val1 = herm.hermval(self.x, pol1)
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
pol2 = [0]*j + [1]
|
||||
val2 = herm.hermval(self.x, pol2)
|
||||
pol3 = herm.hermmul(pol1, pol2)
|
||||
val3 = herm.hermval(self.x, pol3)
|
||||
assert_(len(pol3) == i + j + 1, msg)
|
||||
assert_almost_equal(val3, val1*val2, err_msg=msg)
|
||||
|
||||
def test_hermdiv(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
ci = [0]*i + [1]
|
||||
cj = [0]*j + [1]
|
||||
tgt = herm.hermadd(ci, cj)
|
||||
quo, rem = herm.hermdiv(tgt, ci)
|
||||
res = herm.hermadd(herm.hermmul(quo, ci), rem)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_hermpow(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
c = np.arange(i + 1)
|
||||
tgt = reduce(herm.hermmul, [c]*j, np.array([1]))
|
||||
res = herm.hermpow(c, j)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
|
||||
class TestEvaluation(object):
|
||||
# coefficients of 1 + 2*x + 3*x**2
|
||||
c1d = np.array([2.5, 1., .75])
|
||||
c2d = np.einsum('i,j->ij', c1d, c1d)
|
||||
c3d = np.einsum('i,j,k->ijk', c1d, c1d, c1d)
|
||||
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
y = polyval(x, [1., 2., 3.])
|
||||
|
||||
def test_hermval(self):
|
||||
#check empty input
|
||||
assert_equal(herm.hermval([], [1]).size, 0)
|
||||
|
||||
#check normal input)
|
||||
x = np.linspace(-1, 1)
|
||||
y = [polyval(x, c) for c in Hlist]
|
||||
for i in range(10):
|
||||
msg = "At i=%d" % i
|
||||
tgt = y[i]
|
||||
res = herm.hermval(x, [0]*i + [1])
|
||||
assert_almost_equal(res, tgt, err_msg=msg)
|
||||
|
||||
#check that shape is preserved
|
||||
for i in range(3):
|
||||
dims = [2]*i
|
||||
x = np.zeros(dims)
|
||||
assert_equal(herm.hermval(x, [1]).shape, dims)
|
||||
assert_equal(herm.hermval(x, [1, 0]).shape, dims)
|
||||
assert_equal(herm.hermval(x, [1, 0, 0]).shape, dims)
|
||||
|
||||
def test_hermval2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, herm.hermval2d, x1, x2[:2], self.c2d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2
|
||||
res = herm.hermval2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = herm.hermval2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_hermval3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, herm.hermval3d, x1, x2, x3[:2], self.c3d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2*y3
|
||||
res = herm.hermval3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = herm.hermval3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_hermgrid2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j->ij', y1, y2)
|
||||
res = herm.hermgrid2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = herm.hermgrid2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3)*2)
|
||||
|
||||
def test_hermgrid3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j,k->ijk', y1, y2, y3)
|
||||
res = herm.hermgrid3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = herm.hermgrid3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3)*3)
|
||||
|
||||
|
||||
class TestIntegral(object):
|
||||
|
||||
def test_hermint(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, herm.hermint, [0], .5)
|
||||
assert_raises(ValueError, herm.hermint, [0], -1)
|
||||
assert_raises(ValueError, herm.hermint, [0], 1, [0, 0])
|
||||
assert_raises(ValueError, herm.hermint, [0], lbnd=[0])
|
||||
assert_raises(ValueError, herm.hermint, [0], scl=[0])
|
||||
assert_raises(ValueError, herm.hermint, [0], axis=.5)
|
||||
|
||||
# test integration of zero polynomial
|
||||
for i in range(2, 5):
|
||||
k = [0]*(i - 2) + [1]
|
||||
res = herm.hermint([0], m=i, k=k)
|
||||
assert_almost_equal(res, [0, .5])
|
||||
|
||||
# check single integration with integration constant
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [1/scl]
|
||||
hermpol = herm.poly2herm(pol)
|
||||
hermint = herm.hermint(hermpol, m=1, k=[i])
|
||||
res = herm.herm2poly(hermint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check single integration with integration constant and lbnd
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
hermpol = herm.poly2herm(pol)
|
||||
hermint = herm.hermint(hermpol, m=1, k=[i], lbnd=-1)
|
||||
assert_almost_equal(herm.hermval(-1, hermint), i)
|
||||
|
||||
# check single integration with integration constant and scaling
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [2/scl]
|
||||
hermpol = herm.poly2herm(pol)
|
||||
hermint = herm.hermint(hermpol, m=1, k=[i], scl=2)
|
||||
res = herm.herm2poly(hermint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with default k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = herm.hermint(tgt, m=1)
|
||||
res = herm.hermint(pol, m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with defined k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = herm.hermint(tgt, m=1, k=[k])
|
||||
res = herm.hermint(pol, m=j, k=list(range(j)))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with lbnd
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = herm.hermint(tgt, m=1, k=[k], lbnd=-1)
|
||||
res = herm.hermint(pol, m=j, k=list(range(j)), lbnd=-1)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = herm.hermint(tgt, m=1, k=[k], scl=2)
|
||||
res = herm.hermint(pol, m=j, k=list(range(j)), scl=2)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_hermint_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([herm.hermint(c) for c in c2d.T]).T
|
||||
res = herm.hermint(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([herm.hermint(c) for c in c2d])
|
||||
res = herm.hermint(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([herm.hermint(c, k=3) for c in c2d])
|
||||
res = herm.hermint(c2d, k=3, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestDerivative(object):
|
||||
|
||||
def test_hermder(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, herm.hermder, [0], .5)
|
||||
assert_raises(ValueError, herm.hermder, [0], -1)
|
||||
|
||||
# check that zeroth derivative does nothing
|
||||
for i in range(5):
|
||||
tgt = [0]*i + [1]
|
||||
res = herm.hermder(tgt, m=0)
|
||||
assert_equal(trim(res), trim(tgt))
|
||||
|
||||
# check that derivation is the inverse of integration
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = herm.hermder(herm.hermint(tgt, m=j), m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check derivation with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = herm.hermder(herm.hermint(tgt, m=j, scl=2), m=j, scl=.5)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_hermder_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([herm.hermder(c) for c in c2d.T]).T
|
||||
res = herm.hermder(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([herm.hermder(c) for c in c2d])
|
||||
res = herm.hermder(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestVander(object):
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
|
||||
def test_hermvander(self):
|
||||
# check for 1d x
|
||||
x = np.arange(3)
|
||||
v = herm.hermvander(x, 3)
|
||||
assert_(v.shape == (3, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], herm.hermval(x, coef))
|
||||
|
||||
# check for 2d x
|
||||
x = np.array([[1, 2], [3, 4], [5, 6]])
|
||||
v = herm.hermvander(x, 3)
|
||||
assert_(v.shape == (3, 2, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], herm.hermval(x, coef))
|
||||
|
||||
def test_hermvander2d(self):
|
||||
# also tests hermval2d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3))
|
||||
van = herm.hermvander2d(x1, x2, [1, 2])
|
||||
tgt = herm.hermval2d(x1, x2, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = herm.hermvander2d([x1], [x2], [1, 2])
|
||||
assert_(van.shape == (1, 5, 6))
|
||||
|
||||
def test_hermvander3d(self):
|
||||
# also tests hermval3d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3, 4))
|
||||
van = herm.hermvander3d(x1, x2, x3, [1, 2, 3])
|
||||
tgt = herm.hermval3d(x1, x2, x3, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = herm.hermvander3d([x1], [x2], [x3], [1, 2, 3])
|
||||
assert_(van.shape == (1, 5, 24))
|
||||
|
||||
|
||||
class TestFitting(object):
|
||||
|
||||
def test_hermfit(self):
|
||||
def f(x):
|
||||
return x*(x - 1)*(x - 2)
|
||||
|
||||
def f2(x):
|
||||
return x**4 + x**2 + 1
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, herm.hermfit, [1], [1], -1)
|
||||
assert_raises(TypeError, herm.hermfit, [[1]], [1], 0)
|
||||
assert_raises(TypeError, herm.hermfit, [], [1], 0)
|
||||
assert_raises(TypeError, herm.hermfit, [1], [[[1]]], 0)
|
||||
assert_raises(TypeError, herm.hermfit, [1, 2], [1], 0)
|
||||
assert_raises(TypeError, herm.hermfit, [1], [1, 2], 0)
|
||||
assert_raises(TypeError, herm.hermfit, [1], [1], 0, w=[[1]])
|
||||
assert_raises(TypeError, herm.hermfit, [1], [1], 0, w=[1, 1])
|
||||
assert_raises(ValueError, herm.hermfit, [1], [1], [-1,])
|
||||
assert_raises(ValueError, herm.hermfit, [1], [1], [2, -1, 6])
|
||||
assert_raises(TypeError, herm.hermfit, [1], [1], [])
|
||||
|
||||
# Test fit
|
||||
x = np.linspace(0, 2)
|
||||
y = f(x)
|
||||
#
|
||||
coef3 = herm.hermfit(x, y, 3)
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(herm.hermval(x, coef3), y)
|
||||
coef3 = herm.hermfit(x, y, [0, 1, 2, 3])
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(herm.hermval(x, coef3), y)
|
||||
#
|
||||
coef4 = herm.hermfit(x, y, 4)
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(herm.hermval(x, coef4), y)
|
||||
coef4 = herm.hermfit(x, y, [0, 1, 2, 3, 4])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(herm.hermval(x, coef4), y)
|
||||
# check things still work if deg is not in strict increasing
|
||||
coef4 = herm.hermfit(x, y, [2, 3, 4, 1, 0])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(herm.hermval(x, coef4), y)
|
||||
#
|
||||
coef2d = herm.hermfit(x, np.array([y, y]).T, 3)
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
coef2d = herm.hermfit(x, np.array([y, y]).T, [0, 1, 2, 3])
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
# test weighting
|
||||
w = np.zeros_like(x)
|
||||
yw = y.copy()
|
||||
w[1::2] = 1
|
||||
y[0::2] = 0
|
||||
wcoef3 = herm.hermfit(x, yw, 3, w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
wcoef3 = herm.hermfit(x, yw, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
#
|
||||
wcoef2d = herm.hermfit(x, np.array([yw, yw]).T, 3, w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
wcoef2d = herm.hermfit(x, np.array([yw, yw]).T, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
# test scaling with complex values x points whose square
|
||||
# is zero when summed.
|
||||
x = [1, 1j, -1, -1j]
|
||||
assert_almost_equal(herm.hermfit(x, x, 1), [0, .5])
|
||||
assert_almost_equal(herm.hermfit(x, x, [0, 1]), [0, .5])
|
||||
# test fitting only even Legendre polynomials
|
||||
x = np.linspace(-1, 1)
|
||||
y = f2(x)
|
||||
coef1 = herm.hermfit(x, y, 4)
|
||||
assert_almost_equal(herm.hermval(x, coef1), y)
|
||||
coef2 = herm.hermfit(x, y, [0, 2, 4])
|
||||
assert_almost_equal(herm.hermval(x, coef2), y)
|
||||
assert_almost_equal(coef1, coef2)
|
||||
|
||||
|
||||
class TestCompanion(object):
|
||||
|
||||
def test_raises(self):
|
||||
assert_raises(ValueError, herm.hermcompanion, [])
|
||||
assert_raises(ValueError, herm.hermcompanion, [1])
|
||||
|
||||
def test_dimensions(self):
|
||||
for i in range(1, 5):
|
||||
coef = [0]*i + [1]
|
||||
assert_(herm.hermcompanion(coef).shape == (i, i))
|
||||
|
||||
def test_linear_root(self):
|
||||
assert_(herm.hermcompanion([1, 2])[0, 0] == -.25)
|
||||
|
||||
|
||||
class TestGauss(object):
|
||||
|
||||
def test_100(self):
|
||||
x, w = herm.hermgauss(100)
|
||||
|
||||
# test orthogonality. Note that the results need to be normalized,
|
||||
# otherwise the huge values that can arise from fast growing
|
||||
# functions like Laguerre can be very confusing.
|
||||
v = herm.hermvander(x, 99)
|
||||
vv = np.dot(v.T * w, v)
|
||||
vd = 1/np.sqrt(vv.diagonal())
|
||||
vv = vd[:, None] * vv * vd
|
||||
assert_almost_equal(vv, np.eye(100))
|
||||
|
||||
# check that the integral of 1 is correct
|
||||
tgt = np.sqrt(np.pi)
|
||||
assert_almost_equal(w.sum(), tgt)
|
||||
|
||||
|
||||
class TestMisc(object):
|
||||
|
||||
def test_hermfromroots(self):
|
||||
res = herm.hermfromroots([])
|
||||
assert_almost_equal(trim(res), [1])
|
||||
for i in range(1, 5):
|
||||
roots = np.cos(np.linspace(-np.pi, 0, 2*i + 1)[1::2])
|
||||
pol = herm.hermfromroots(roots)
|
||||
res = herm.hermval(roots, pol)
|
||||
tgt = 0
|
||||
assert_(len(pol) == i + 1)
|
||||
assert_almost_equal(herm.herm2poly(pol)[-1], 1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
def test_hermroots(self):
|
||||
assert_almost_equal(herm.hermroots([1]), [])
|
||||
assert_almost_equal(herm.hermroots([1, 1]), [-.5])
|
||||
for i in range(2, 5):
|
||||
tgt = np.linspace(-1, 1, i)
|
||||
res = herm.hermroots(herm.hermfromroots(tgt))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_hermtrim(self):
|
||||
coef = [2, -1, 1, 0]
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, herm.hermtrim, coef, -1)
|
||||
|
||||
# Test results
|
||||
assert_equal(herm.hermtrim(coef), coef[:-1])
|
||||
assert_equal(herm.hermtrim(coef, 1), coef[:-3])
|
||||
assert_equal(herm.hermtrim(coef, 2), [0])
|
||||
|
||||
def test_hermline(self):
|
||||
assert_equal(herm.hermline(3, 4), [3, 2])
|
||||
|
||||
def test_herm2poly(self):
|
||||
for i in range(10):
|
||||
assert_almost_equal(herm.herm2poly([0]*i + [1]), Hlist[i])
|
||||
|
||||
def test_poly2herm(self):
|
||||
for i in range(10):
|
||||
assert_almost_equal(herm.poly2herm(Hlist[i]), [0]*i + [1])
|
||||
|
||||
def test_weight(self):
|
||||
x = np.linspace(-5, 5, 11)
|
||||
tgt = np.exp(-x**2)
|
||||
res = herm.hermweight(x)
|
||||
assert_almost_equal(res, tgt)
|
||||
@@ -0,0 +1,558 @@
|
||||
"""Tests for hermite_e module.
|
||||
|
||||
"""
|
||||
from __future__ import division, absolute_import, print_function
|
||||
|
||||
from functools import reduce
|
||||
|
||||
import numpy as np
|
||||
import numpy.polynomial.hermite_e as herme
|
||||
from numpy.polynomial.polynomial import polyval
|
||||
from numpy.testing import (
|
||||
assert_almost_equal, assert_raises, assert_equal, assert_,
|
||||
)
|
||||
|
||||
He0 = np.array([1])
|
||||
He1 = np.array([0, 1])
|
||||
He2 = np.array([-1, 0, 1])
|
||||
He3 = np.array([0, -3, 0, 1])
|
||||
He4 = np.array([3, 0, -6, 0, 1])
|
||||
He5 = np.array([0, 15, 0, -10, 0, 1])
|
||||
He6 = np.array([-15, 0, 45, 0, -15, 0, 1])
|
||||
He7 = np.array([0, -105, 0, 105, 0, -21, 0, 1])
|
||||
He8 = np.array([105, 0, -420, 0, 210, 0, -28, 0, 1])
|
||||
He9 = np.array([0, 945, 0, -1260, 0, 378, 0, -36, 0, 1])
|
||||
|
||||
Helist = [He0, He1, He2, He3, He4, He5, He6, He7, He8, He9]
|
||||
|
||||
|
||||
def trim(x):
|
||||
return herme.hermetrim(x, tol=1e-6)
|
||||
|
||||
|
||||
class TestConstants(object):
|
||||
|
||||
def test_hermedomain(self):
|
||||
assert_equal(herme.hermedomain, [-1, 1])
|
||||
|
||||
def test_hermezero(self):
|
||||
assert_equal(herme.hermezero, [0])
|
||||
|
||||
def test_hermeone(self):
|
||||
assert_equal(herme.hermeone, [1])
|
||||
|
||||
def test_hermex(self):
|
||||
assert_equal(herme.hermex, [0, 1])
|
||||
|
||||
|
||||
class TestArithmetic(object):
|
||||
x = np.linspace(-3, 3, 100)
|
||||
|
||||
def test_hermeadd(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] += 1
|
||||
res = herme.hermeadd([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_hermesub(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] -= 1
|
||||
res = herme.hermesub([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_hermemulx(self):
|
||||
assert_equal(herme.hermemulx([0]), [0])
|
||||
assert_equal(herme.hermemulx([1]), [0, 1])
|
||||
for i in range(1, 5):
|
||||
ser = [0]*i + [1]
|
||||
tgt = [0]*(i - 1) + [i, 0, 1]
|
||||
assert_equal(herme.hermemulx(ser), tgt)
|
||||
|
||||
def test_hermemul(self):
|
||||
# check values of result
|
||||
for i in range(5):
|
||||
pol1 = [0]*i + [1]
|
||||
val1 = herme.hermeval(self.x, pol1)
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
pol2 = [0]*j + [1]
|
||||
val2 = herme.hermeval(self.x, pol2)
|
||||
pol3 = herme.hermemul(pol1, pol2)
|
||||
val3 = herme.hermeval(self.x, pol3)
|
||||
assert_(len(pol3) == i + j + 1, msg)
|
||||
assert_almost_equal(val3, val1*val2, err_msg=msg)
|
||||
|
||||
def test_hermediv(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
ci = [0]*i + [1]
|
||||
cj = [0]*j + [1]
|
||||
tgt = herme.hermeadd(ci, cj)
|
||||
quo, rem = herme.hermediv(tgt, ci)
|
||||
res = herme.hermeadd(herme.hermemul(quo, ci), rem)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_hermepow(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
c = np.arange(i + 1)
|
||||
tgt = reduce(herme.hermemul, [c]*j, np.array([1]))
|
||||
res = herme.hermepow(c, j)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
|
||||
class TestEvaluation(object):
|
||||
# coefficients of 1 + 2*x + 3*x**2
|
||||
c1d = np.array([4., 2., 3.])
|
||||
c2d = np.einsum('i,j->ij', c1d, c1d)
|
||||
c3d = np.einsum('i,j,k->ijk', c1d, c1d, c1d)
|
||||
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
y = polyval(x, [1., 2., 3.])
|
||||
|
||||
def test_hermeval(self):
|
||||
#check empty input
|
||||
assert_equal(herme.hermeval([], [1]).size, 0)
|
||||
|
||||
#check normal input)
|
||||
x = np.linspace(-1, 1)
|
||||
y = [polyval(x, c) for c in Helist]
|
||||
for i in range(10):
|
||||
msg = "At i=%d" % i
|
||||
tgt = y[i]
|
||||
res = herme.hermeval(x, [0]*i + [1])
|
||||
assert_almost_equal(res, tgt, err_msg=msg)
|
||||
|
||||
#check that shape is preserved
|
||||
for i in range(3):
|
||||
dims = [2]*i
|
||||
x = np.zeros(dims)
|
||||
assert_equal(herme.hermeval(x, [1]).shape, dims)
|
||||
assert_equal(herme.hermeval(x, [1, 0]).shape, dims)
|
||||
assert_equal(herme.hermeval(x, [1, 0, 0]).shape, dims)
|
||||
|
||||
def test_hermeval2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, herme.hermeval2d, x1, x2[:2], self.c2d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2
|
||||
res = herme.hermeval2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = herme.hermeval2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_hermeval3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, herme.hermeval3d, x1, x2, x3[:2], self.c3d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2*y3
|
||||
res = herme.hermeval3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = herme.hermeval3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_hermegrid2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j->ij', y1, y2)
|
||||
res = herme.hermegrid2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = herme.hermegrid2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3)*2)
|
||||
|
||||
def test_hermegrid3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j,k->ijk', y1, y2, y3)
|
||||
res = herme.hermegrid3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = herme.hermegrid3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3)*3)
|
||||
|
||||
|
||||
class TestIntegral(object):
|
||||
|
||||
def test_hermeint(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, herme.hermeint, [0], .5)
|
||||
assert_raises(ValueError, herme.hermeint, [0], -1)
|
||||
assert_raises(ValueError, herme.hermeint, [0], 1, [0, 0])
|
||||
assert_raises(ValueError, herme.hermeint, [0], lbnd=[0])
|
||||
assert_raises(ValueError, herme.hermeint, [0], scl=[0])
|
||||
assert_raises(ValueError, herme.hermeint, [0], axis=.5)
|
||||
|
||||
# test integration of zero polynomial
|
||||
for i in range(2, 5):
|
||||
k = [0]*(i - 2) + [1]
|
||||
res = herme.hermeint([0], m=i, k=k)
|
||||
assert_almost_equal(res, [0, 1])
|
||||
|
||||
# check single integration with integration constant
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [1/scl]
|
||||
hermepol = herme.poly2herme(pol)
|
||||
hermeint = herme.hermeint(hermepol, m=1, k=[i])
|
||||
res = herme.herme2poly(hermeint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check single integration with integration constant and lbnd
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
hermepol = herme.poly2herme(pol)
|
||||
hermeint = herme.hermeint(hermepol, m=1, k=[i], lbnd=-1)
|
||||
assert_almost_equal(herme.hermeval(-1, hermeint), i)
|
||||
|
||||
# check single integration with integration constant and scaling
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [2/scl]
|
||||
hermepol = herme.poly2herme(pol)
|
||||
hermeint = herme.hermeint(hermepol, m=1, k=[i], scl=2)
|
||||
res = herme.herme2poly(hermeint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with default k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = herme.hermeint(tgt, m=1)
|
||||
res = herme.hermeint(pol, m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with defined k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = herme.hermeint(tgt, m=1, k=[k])
|
||||
res = herme.hermeint(pol, m=j, k=list(range(j)))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with lbnd
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = herme.hermeint(tgt, m=1, k=[k], lbnd=-1)
|
||||
res = herme.hermeint(pol, m=j, k=list(range(j)), lbnd=-1)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = herme.hermeint(tgt, m=1, k=[k], scl=2)
|
||||
res = herme.hermeint(pol, m=j, k=list(range(j)), scl=2)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_hermeint_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([herme.hermeint(c) for c in c2d.T]).T
|
||||
res = herme.hermeint(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([herme.hermeint(c) for c in c2d])
|
||||
res = herme.hermeint(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([herme.hermeint(c, k=3) for c in c2d])
|
||||
res = herme.hermeint(c2d, k=3, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestDerivative(object):
|
||||
|
||||
def test_hermeder(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, herme.hermeder, [0], .5)
|
||||
assert_raises(ValueError, herme.hermeder, [0], -1)
|
||||
|
||||
# check that zeroth derivative does nothing
|
||||
for i in range(5):
|
||||
tgt = [0]*i + [1]
|
||||
res = herme.hermeder(tgt, m=0)
|
||||
assert_equal(trim(res), trim(tgt))
|
||||
|
||||
# check that derivation is the inverse of integration
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = herme.hermeder(herme.hermeint(tgt, m=j), m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check derivation with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = herme.hermeder(
|
||||
herme.hermeint(tgt, m=j, scl=2), m=j, scl=.5)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_hermeder_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([herme.hermeder(c) for c in c2d.T]).T
|
||||
res = herme.hermeder(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([herme.hermeder(c) for c in c2d])
|
||||
res = herme.hermeder(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestVander(object):
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
|
||||
def test_hermevander(self):
|
||||
# check for 1d x
|
||||
x = np.arange(3)
|
||||
v = herme.hermevander(x, 3)
|
||||
assert_(v.shape == (3, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], herme.hermeval(x, coef))
|
||||
|
||||
# check for 2d x
|
||||
x = np.array([[1, 2], [3, 4], [5, 6]])
|
||||
v = herme.hermevander(x, 3)
|
||||
assert_(v.shape == (3, 2, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], herme.hermeval(x, coef))
|
||||
|
||||
def test_hermevander2d(self):
|
||||
# also tests hermeval2d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3))
|
||||
van = herme.hermevander2d(x1, x2, [1, 2])
|
||||
tgt = herme.hermeval2d(x1, x2, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = herme.hermevander2d([x1], [x2], [1, 2])
|
||||
assert_(van.shape == (1, 5, 6))
|
||||
|
||||
def test_hermevander3d(self):
|
||||
# also tests hermeval3d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3, 4))
|
||||
van = herme.hermevander3d(x1, x2, x3, [1, 2, 3])
|
||||
tgt = herme.hermeval3d(x1, x2, x3, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = herme.hermevander3d([x1], [x2], [x3], [1, 2, 3])
|
||||
assert_(van.shape == (1, 5, 24))
|
||||
|
||||
|
||||
class TestFitting(object):
|
||||
|
||||
def test_hermefit(self):
|
||||
def f(x):
|
||||
return x*(x - 1)*(x - 2)
|
||||
|
||||
def f2(x):
|
||||
return x**4 + x**2 + 1
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, herme.hermefit, [1], [1], -1)
|
||||
assert_raises(TypeError, herme.hermefit, [[1]], [1], 0)
|
||||
assert_raises(TypeError, herme.hermefit, [], [1], 0)
|
||||
assert_raises(TypeError, herme.hermefit, [1], [[[1]]], 0)
|
||||
assert_raises(TypeError, herme.hermefit, [1, 2], [1], 0)
|
||||
assert_raises(TypeError, herme.hermefit, [1], [1, 2], 0)
|
||||
assert_raises(TypeError, herme.hermefit, [1], [1], 0, w=[[1]])
|
||||
assert_raises(TypeError, herme.hermefit, [1], [1], 0, w=[1, 1])
|
||||
assert_raises(ValueError, herme.hermefit, [1], [1], [-1,])
|
||||
assert_raises(ValueError, herme.hermefit, [1], [1], [2, -1, 6])
|
||||
assert_raises(TypeError, herme.hermefit, [1], [1], [])
|
||||
|
||||
# Test fit
|
||||
x = np.linspace(0, 2)
|
||||
y = f(x)
|
||||
#
|
||||
coef3 = herme.hermefit(x, y, 3)
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(herme.hermeval(x, coef3), y)
|
||||
coef3 = herme.hermefit(x, y, [0, 1, 2, 3])
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(herme.hermeval(x, coef3), y)
|
||||
#
|
||||
coef4 = herme.hermefit(x, y, 4)
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(herme.hermeval(x, coef4), y)
|
||||
coef4 = herme.hermefit(x, y, [0, 1, 2, 3, 4])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(herme.hermeval(x, coef4), y)
|
||||
# check things still work if deg is not in strict increasing
|
||||
coef4 = herme.hermefit(x, y, [2, 3, 4, 1, 0])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(herme.hermeval(x, coef4), y)
|
||||
#
|
||||
coef2d = herme.hermefit(x, np.array([y, y]).T, 3)
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
coef2d = herme.hermefit(x, np.array([y, y]).T, [0, 1, 2, 3])
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
# test weighting
|
||||
w = np.zeros_like(x)
|
||||
yw = y.copy()
|
||||
w[1::2] = 1
|
||||
y[0::2] = 0
|
||||
wcoef3 = herme.hermefit(x, yw, 3, w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
wcoef3 = herme.hermefit(x, yw, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
#
|
||||
wcoef2d = herme.hermefit(x, np.array([yw, yw]).T, 3, w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
wcoef2d = herme.hermefit(x, np.array([yw, yw]).T, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
# test scaling with complex values x points whose square
|
||||
# is zero when summed.
|
||||
x = [1, 1j, -1, -1j]
|
||||
assert_almost_equal(herme.hermefit(x, x, 1), [0, 1])
|
||||
assert_almost_equal(herme.hermefit(x, x, [0, 1]), [0, 1])
|
||||
# test fitting only even Legendre polynomials
|
||||
x = np.linspace(-1, 1)
|
||||
y = f2(x)
|
||||
coef1 = herme.hermefit(x, y, 4)
|
||||
assert_almost_equal(herme.hermeval(x, coef1), y)
|
||||
coef2 = herme.hermefit(x, y, [0, 2, 4])
|
||||
assert_almost_equal(herme.hermeval(x, coef2), y)
|
||||
assert_almost_equal(coef1, coef2)
|
||||
|
||||
|
||||
class TestCompanion(object):
|
||||
|
||||
def test_raises(self):
|
||||
assert_raises(ValueError, herme.hermecompanion, [])
|
||||
assert_raises(ValueError, herme.hermecompanion, [1])
|
||||
|
||||
def test_dimensions(self):
|
||||
for i in range(1, 5):
|
||||
coef = [0]*i + [1]
|
||||
assert_(herme.hermecompanion(coef).shape == (i, i))
|
||||
|
||||
def test_linear_root(self):
|
||||
assert_(herme.hermecompanion([1, 2])[0, 0] == -.5)
|
||||
|
||||
|
||||
class TestGauss(object):
|
||||
|
||||
def test_100(self):
|
||||
x, w = herme.hermegauss(100)
|
||||
|
||||
# test orthogonality. Note that the results need to be normalized,
|
||||
# otherwise the huge values that can arise from fast growing
|
||||
# functions like Laguerre can be very confusing.
|
||||
v = herme.hermevander(x, 99)
|
||||
vv = np.dot(v.T * w, v)
|
||||
vd = 1/np.sqrt(vv.diagonal())
|
||||
vv = vd[:, None] * vv * vd
|
||||
assert_almost_equal(vv, np.eye(100))
|
||||
|
||||
# check that the integral of 1 is correct
|
||||
tgt = np.sqrt(2*np.pi)
|
||||
assert_almost_equal(w.sum(), tgt)
|
||||
|
||||
|
||||
class TestMisc(object):
|
||||
|
||||
def test_hermefromroots(self):
|
||||
res = herme.hermefromroots([])
|
||||
assert_almost_equal(trim(res), [1])
|
||||
for i in range(1, 5):
|
||||
roots = np.cos(np.linspace(-np.pi, 0, 2*i + 1)[1::2])
|
||||
pol = herme.hermefromroots(roots)
|
||||
res = herme.hermeval(roots, pol)
|
||||
tgt = 0
|
||||
assert_(len(pol) == i + 1)
|
||||
assert_almost_equal(herme.herme2poly(pol)[-1], 1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
def test_hermeroots(self):
|
||||
assert_almost_equal(herme.hermeroots([1]), [])
|
||||
assert_almost_equal(herme.hermeroots([1, 1]), [-1])
|
||||
for i in range(2, 5):
|
||||
tgt = np.linspace(-1, 1, i)
|
||||
res = herme.hermeroots(herme.hermefromroots(tgt))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_hermetrim(self):
|
||||
coef = [2, -1, 1, 0]
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, herme.hermetrim, coef, -1)
|
||||
|
||||
# Test results
|
||||
assert_equal(herme.hermetrim(coef), coef[:-1])
|
||||
assert_equal(herme.hermetrim(coef, 1), coef[:-3])
|
||||
assert_equal(herme.hermetrim(coef, 2), [0])
|
||||
|
||||
def test_hermeline(self):
|
||||
assert_equal(herme.hermeline(3, 4), [3, 4])
|
||||
|
||||
def test_herme2poly(self):
|
||||
for i in range(10):
|
||||
assert_almost_equal(herme.herme2poly([0]*i + [1]), Helist[i])
|
||||
|
||||
def test_poly2herme(self):
|
||||
for i in range(10):
|
||||
assert_almost_equal(herme.poly2herme(Helist[i]), [0]*i + [1])
|
||||
|
||||
def test_weight(self):
|
||||
x = np.linspace(-5, 5, 11)
|
||||
tgt = np.exp(-.5*x**2)
|
||||
res = herme.hermeweight(x)
|
||||
assert_almost_equal(res, tgt)
|
||||
@@ -0,0 +1,539 @@
|
||||
"""Tests for laguerre module.
|
||||
|
||||
"""
|
||||
from __future__ import division, absolute_import, print_function
|
||||
|
||||
from functools import reduce
|
||||
|
||||
import numpy as np
|
||||
import numpy.polynomial.laguerre as lag
|
||||
from numpy.polynomial.polynomial import polyval
|
||||
from numpy.testing import (
|
||||
assert_almost_equal, assert_raises, assert_equal, assert_,
|
||||
)
|
||||
|
||||
L0 = np.array([1])/1
|
||||
L1 = np.array([1, -1])/1
|
||||
L2 = np.array([2, -4, 1])/2
|
||||
L3 = np.array([6, -18, 9, -1])/6
|
||||
L4 = np.array([24, -96, 72, -16, 1])/24
|
||||
L5 = np.array([120, -600, 600, -200, 25, -1])/120
|
||||
L6 = np.array([720, -4320, 5400, -2400, 450, -36, 1])/720
|
||||
|
||||
Llist = [L0, L1, L2, L3, L4, L5, L6]
|
||||
|
||||
|
||||
def trim(x):
|
||||
return lag.lagtrim(x, tol=1e-6)
|
||||
|
||||
|
||||
class TestConstants(object):
|
||||
|
||||
def test_lagdomain(self):
|
||||
assert_equal(lag.lagdomain, [0, 1])
|
||||
|
||||
def test_lagzero(self):
|
||||
assert_equal(lag.lagzero, [0])
|
||||
|
||||
def test_lagone(self):
|
||||
assert_equal(lag.lagone, [1])
|
||||
|
||||
def test_lagx(self):
|
||||
assert_equal(lag.lagx, [1, -1])
|
||||
|
||||
|
||||
class TestArithmetic(object):
|
||||
x = np.linspace(-3, 3, 100)
|
||||
|
||||
def test_lagadd(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] += 1
|
||||
res = lag.lagadd([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_lagsub(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] -= 1
|
||||
res = lag.lagsub([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_lagmulx(self):
|
||||
assert_equal(lag.lagmulx([0]), [0])
|
||||
assert_equal(lag.lagmulx([1]), [1, -1])
|
||||
for i in range(1, 5):
|
||||
ser = [0]*i + [1]
|
||||
tgt = [0]*(i - 1) + [-i, 2*i + 1, -(i + 1)]
|
||||
assert_almost_equal(lag.lagmulx(ser), tgt)
|
||||
|
||||
def test_lagmul(self):
|
||||
# check values of result
|
||||
for i in range(5):
|
||||
pol1 = [0]*i + [1]
|
||||
val1 = lag.lagval(self.x, pol1)
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
pol2 = [0]*j + [1]
|
||||
val2 = lag.lagval(self.x, pol2)
|
||||
pol3 = lag.lagmul(pol1, pol2)
|
||||
val3 = lag.lagval(self.x, pol3)
|
||||
assert_(len(pol3) == i + j + 1, msg)
|
||||
assert_almost_equal(val3, val1*val2, err_msg=msg)
|
||||
|
||||
def test_lagdiv(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
ci = [0]*i + [1]
|
||||
cj = [0]*j + [1]
|
||||
tgt = lag.lagadd(ci, cj)
|
||||
quo, rem = lag.lagdiv(tgt, ci)
|
||||
res = lag.lagadd(lag.lagmul(quo, ci), rem)
|
||||
assert_almost_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_lagpow(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
c = np.arange(i + 1)
|
||||
tgt = reduce(lag.lagmul, [c]*j, np.array([1]))
|
||||
res = lag.lagpow(c, j)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
|
||||
class TestEvaluation(object):
|
||||
# coefficients of 1 + 2*x + 3*x**2
|
||||
c1d = np.array([9., -14., 6.])
|
||||
c2d = np.einsum('i,j->ij', c1d, c1d)
|
||||
c3d = np.einsum('i,j,k->ijk', c1d, c1d, c1d)
|
||||
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
y = polyval(x, [1., 2., 3.])
|
||||
|
||||
def test_lagval(self):
|
||||
#check empty input
|
||||
assert_equal(lag.lagval([], [1]).size, 0)
|
||||
|
||||
#check normal input)
|
||||
x = np.linspace(-1, 1)
|
||||
y = [polyval(x, c) for c in Llist]
|
||||
for i in range(7):
|
||||
msg = "At i=%d" % i
|
||||
tgt = y[i]
|
||||
res = lag.lagval(x, [0]*i + [1])
|
||||
assert_almost_equal(res, tgt, err_msg=msg)
|
||||
|
||||
#check that shape is preserved
|
||||
for i in range(3):
|
||||
dims = [2]*i
|
||||
x = np.zeros(dims)
|
||||
assert_equal(lag.lagval(x, [1]).shape, dims)
|
||||
assert_equal(lag.lagval(x, [1, 0]).shape, dims)
|
||||
assert_equal(lag.lagval(x, [1, 0, 0]).shape, dims)
|
||||
|
||||
def test_lagval2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, lag.lagval2d, x1, x2[:2], self.c2d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2
|
||||
res = lag.lagval2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = lag.lagval2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_lagval3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, lag.lagval3d, x1, x2, x3[:2], self.c3d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2*y3
|
||||
res = lag.lagval3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = lag.lagval3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_laggrid2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j->ij', y1, y2)
|
||||
res = lag.laggrid2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = lag.laggrid2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3)*2)
|
||||
|
||||
def test_laggrid3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j,k->ijk', y1, y2, y3)
|
||||
res = lag.laggrid3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = lag.laggrid3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3)*3)
|
||||
|
||||
|
||||
class TestIntegral(object):
|
||||
|
||||
def test_lagint(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, lag.lagint, [0], .5)
|
||||
assert_raises(ValueError, lag.lagint, [0], -1)
|
||||
assert_raises(ValueError, lag.lagint, [0], 1, [0, 0])
|
||||
assert_raises(ValueError, lag.lagint, [0], lbnd=[0])
|
||||
assert_raises(ValueError, lag.lagint, [0], scl=[0])
|
||||
assert_raises(ValueError, lag.lagint, [0], axis=.5)
|
||||
|
||||
# test integration of zero polynomial
|
||||
for i in range(2, 5):
|
||||
k = [0]*(i - 2) + [1]
|
||||
res = lag.lagint([0], m=i, k=k)
|
||||
assert_almost_equal(res, [1, -1])
|
||||
|
||||
# check single integration with integration constant
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [1/scl]
|
||||
lagpol = lag.poly2lag(pol)
|
||||
lagint = lag.lagint(lagpol, m=1, k=[i])
|
||||
res = lag.lag2poly(lagint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check single integration with integration constant and lbnd
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
lagpol = lag.poly2lag(pol)
|
||||
lagint = lag.lagint(lagpol, m=1, k=[i], lbnd=-1)
|
||||
assert_almost_equal(lag.lagval(-1, lagint), i)
|
||||
|
||||
# check single integration with integration constant and scaling
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [2/scl]
|
||||
lagpol = lag.poly2lag(pol)
|
||||
lagint = lag.lagint(lagpol, m=1, k=[i], scl=2)
|
||||
res = lag.lag2poly(lagint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with default k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = lag.lagint(tgt, m=1)
|
||||
res = lag.lagint(pol, m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with defined k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = lag.lagint(tgt, m=1, k=[k])
|
||||
res = lag.lagint(pol, m=j, k=list(range(j)))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with lbnd
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = lag.lagint(tgt, m=1, k=[k], lbnd=-1)
|
||||
res = lag.lagint(pol, m=j, k=list(range(j)), lbnd=-1)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = lag.lagint(tgt, m=1, k=[k], scl=2)
|
||||
res = lag.lagint(pol, m=j, k=list(range(j)), scl=2)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_lagint_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([lag.lagint(c) for c in c2d.T]).T
|
||||
res = lag.lagint(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([lag.lagint(c) for c in c2d])
|
||||
res = lag.lagint(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([lag.lagint(c, k=3) for c in c2d])
|
||||
res = lag.lagint(c2d, k=3, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestDerivative(object):
|
||||
|
||||
def test_lagder(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, lag.lagder, [0], .5)
|
||||
assert_raises(ValueError, lag.lagder, [0], -1)
|
||||
|
||||
# check that zeroth derivative does nothing
|
||||
for i in range(5):
|
||||
tgt = [0]*i + [1]
|
||||
res = lag.lagder(tgt, m=0)
|
||||
assert_equal(trim(res), trim(tgt))
|
||||
|
||||
# check that derivation is the inverse of integration
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = lag.lagder(lag.lagint(tgt, m=j), m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check derivation with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = lag.lagder(lag.lagint(tgt, m=j, scl=2), m=j, scl=.5)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_lagder_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([lag.lagder(c) for c in c2d.T]).T
|
||||
res = lag.lagder(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([lag.lagder(c) for c in c2d])
|
||||
res = lag.lagder(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestVander(object):
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
|
||||
def test_lagvander(self):
|
||||
# check for 1d x
|
||||
x = np.arange(3)
|
||||
v = lag.lagvander(x, 3)
|
||||
assert_(v.shape == (3, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], lag.lagval(x, coef))
|
||||
|
||||
# check for 2d x
|
||||
x = np.array([[1, 2], [3, 4], [5, 6]])
|
||||
v = lag.lagvander(x, 3)
|
||||
assert_(v.shape == (3, 2, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], lag.lagval(x, coef))
|
||||
|
||||
def test_lagvander2d(self):
|
||||
# also tests lagval2d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3))
|
||||
van = lag.lagvander2d(x1, x2, [1, 2])
|
||||
tgt = lag.lagval2d(x1, x2, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = lag.lagvander2d([x1], [x2], [1, 2])
|
||||
assert_(van.shape == (1, 5, 6))
|
||||
|
||||
def test_lagvander3d(self):
|
||||
# also tests lagval3d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3, 4))
|
||||
van = lag.lagvander3d(x1, x2, x3, [1, 2, 3])
|
||||
tgt = lag.lagval3d(x1, x2, x3, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = lag.lagvander3d([x1], [x2], [x3], [1, 2, 3])
|
||||
assert_(van.shape == (1, 5, 24))
|
||||
|
||||
|
||||
class TestFitting(object):
|
||||
|
||||
def test_lagfit(self):
|
||||
def f(x):
|
||||
return x*(x - 1)*(x - 2)
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, lag.lagfit, [1], [1], -1)
|
||||
assert_raises(TypeError, lag.lagfit, [[1]], [1], 0)
|
||||
assert_raises(TypeError, lag.lagfit, [], [1], 0)
|
||||
assert_raises(TypeError, lag.lagfit, [1], [[[1]]], 0)
|
||||
assert_raises(TypeError, lag.lagfit, [1, 2], [1], 0)
|
||||
assert_raises(TypeError, lag.lagfit, [1], [1, 2], 0)
|
||||
assert_raises(TypeError, lag.lagfit, [1], [1], 0, w=[[1]])
|
||||
assert_raises(TypeError, lag.lagfit, [1], [1], 0, w=[1, 1])
|
||||
assert_raises(ValueError, lag.lagfit, [1], [1], [-1,])
|
||||
assert_raises(ValueError, lag.lagfit, [1], [1], [2, -1, 6])
|
||||
assert_raises(TypeError, lag.lagfit, [1], [1], [])
|
||||
|
||||
# Test fit
|
||||
x = np.linspace(0, 2)
|
||||
y = f(x)
|
||||
#
|
||||
coef3 = lag.lagfit(x, y, 3)
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(lag.lagval(x, coef3), y)
|
||||
coef3 = lag.lagfit(x, y, [0, 1, 2, 3])
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(lag.lagval(x, coef3), y)
|
||||
#
|
||||
coef4 = lag.lagfit(x, y, 4)
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(lag.lagval(x, coef4), y)
|
||||
coef4 = lag.lagfit(x, y, [0, 1, 2, 3, 4])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(lag.lagval(x, coef4), y)
|
||||
#
|
||||
coef2d = lag.lagfit(x, np.array([y, y]).T, 3)
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
coef2d = lag.lagfit(x, np.array([y, y]).T, [0, 1, 2, 3])
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
# test weighting
|
||||
w = np.zeros_like(x)
|
||||
yw = y.copy()
|
||||
w[1::2] = 1
|
||||
y[0::2] = 0
|
||||
wcoef3 = lag.lagfit(x, yw, 3, w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
wcoef3 = lag.lagfit(x, yw, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
#
|
||||
wcoef2d = lag.lagfit(x, np.array([yw, yw]).T, 3, w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
wcoef2d = lag.lagfit(x, np.array([yw, yw]).T, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
# test scaling with complex values x points whose square
|
||||
# is zero when summed.
|
||||
x = [1, 1j, -1, -1j]
|
||||
assert_almost_equal(lag.lagfit(x, x, 1), [1, -1])
|
||||
assert_almost_equal(lag.lagfit(x, x, [0, 1]), [1, -1])
|
||||
|
||||
|
||||
class TestCompanion(object):
|
||||
|
||||
def test_raises(self):
|
||||
assert_raises(ValueError, lag.lagcompanion, [])
|
||||
assert_raises(ValueError, lag.lagcompanion, [1])
|
||||
|
||||
def test_dimensions(self):
|
||||
for i in range(1, 5):
|
||||
coef = [0]*i + [1]
|
||||
assert_(lag.lagcompanion(coef).shape == (i, i))
|
||||
|
||||
def test_linear_root(self):
|
||||
assert_(lag.lagcompanion([1, 2])[0, 0] == 1.5)
|
||||
|
||||
|
||||
class TestGauss(object):
|
||||
|
||||
def test_100(self):
|
||||
x, w = lag.laggauss(100)
|
||||
|
||||
# test orthogonality. Note that the results need to be normalized,
|
||||
# otherwise the huge values that can arise from fast growing
|
||||
# functions like Laguerre can be very confusing.
|
||||
v = lag.lagvander(x, 99)
|
||||
vv = np.dot(v.T * w, v)
|
||||
vd = 1/np.sqrt(vv.diagonal())
|
||||
vv = vd[:, None] * vv * vd
|
||||
assert_almost_equal(vv, np.eye(100))
|
||||
|
||||
# check that the integral of 1 is correct
|
||||
tgt = 1.0
|
||||
assert_almost_equal(w.sum(), tgt)
|
||||
|
||||
|
||||
class TestMisc(object):
|
||||
|
||||
def test_lagfromroots(self):
|
||||
res = lag.lagfromroots([])
|
||||
assert_almost_equal(trim(res), [1])
|
||||
for i in range(1, 5):
|
||||
roots = np.cos(np.linspace(-np.pi, 0, 2*i + 1)[1::2])
|
||||
pol = lag.lagfromroots(roots)
|
||||
res = lag.lagval(roots, pol)
|
||||
tgt = 0
|
||||
assert_(len(pol) == i + 1)
|
||||
assert_almost_equal(lag.lag2poly(pol)[-1], 1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
def test_lagroots(self):
|
||||
assert_almost_equal(lag.lagroots([1]), [])
|
||||
assert_almost_equal(lag.lagroots([0, 1]), [1])
|
||||
for i in range(2, 5):
|
||||
tgt = np.linspace(0, 3, i)
|
||||
res = lag.lagroots(lag.lagfromroots(tgt))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_lagtrim(self):
|
||||
coef = [2, -1, 1, 0]
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, lag.lagtrim, coef, -1)
|
||||
|
||||
# Test results
|
||||
assert_equal(lag.lagtrim(coef), coef[:-1])
|
||||
assert_equal(lag.lagtrim(coef, 1), coef[:-3])
|
||||
assert_equal(lag.lagtrim(coef, 2), [0])
|
||||
|
||||
def test_lagline(self):
|
||||
assert_equal(lag.lagline(3, 4), [7, -4])
|
||||
|
||||
def test_lag2poly(self):
|
||||
for i in range(7):
|
||||
assert_almost_equal(lag.lag2poly([0]*i + [1]), Llist[i])
|
||||
|
||||
def test_poly2lag(self):
|
||||
for i in range(7):
|
||||
assert_almost_equal(lag.poly2lag(Llist[i]), [0]*i + [1])
|
||||
|
||||
def test_weight(self):
|
||||
x = np.linspace(0, 10, 11)
|
||||
tgt = np.exp(-x)
|
||||
res = lag.lagweight(x)
|
||||
assert_almost_equal(res, tgt)
|
||||
@@ -0,0 +1,558 @@
|
||||
"""Tests for legendre module.
|
||||
|
||||
"""
|
||||
from __future__ import division, absolute_import, print_function
|
||||
|
||||
from functools import reduce
|
||||
|
||||
import numpy as np
|
||||
import numpy.polynomial.legendre as leg
|
||||
from numpy.polynomial.polynomial import polyval
|
||||
from numpy.testing import (
|
||||
assert_almost_equal, assert_raises, assert_equal, assert_,
|
||||
)
|
||||
|
||||
L0 = np.array([1])
|
||||
L1 = np.array([0, 1])
|
||||
L2 = np.array([-1, 0, 3])/2
|
||||
L3 = np.array([0, -3, 0, 5])/2
|
||||
L4 = np.array([3, 0, -30, 0, 35])/8
|
||||
L5 = np.array([0, 15, 0, -70, 0, 63])/8
|
||||
L6 = np.array([-5, 0, 105, 0, -315, 0, 231])/16
|
||||
L7 = np.array([0, -35, 0, 315, 0, -693, 0, 429])/16
|
||||
L8 = np.array([35, 0, -1260, 0, 6930, 0, -12012, 0, 6435])/128
|
||||
L9 = np.array([0, 315, 0, -4620, 0, 18018, 0, -25740, 0, 12155])/128
|
||||
|
||||
Llist = [L0, L1, L2, L3, L4, L5, L6, L7, L8, L9]
|
||||
|
||||
|
||||
def trim(x):
|
||||
return leg.legtrim(x, tol=1e-6)
|
||||
|
||||
|
||||
class TestConstants(object):
|
||||
|
||||
def test_legdomain(self):
|
||||
assert_equal(leg.legdomain, [-1, 1])
|
||||
|
||||
def test_legzero(self):
|
||||
assert_equal(leg.legzero, [0])
|
||||
|
||||
def test_legone(self):
|
||||
assert_equal(leg.legone, [1])
|
||||
|
||||
def test_legx(self):
|
||||
assert_equal(leg.legx, [0, 1])
|
||||
|
||||
|
||||
class TestArithmetic(object):
|
||||
x = np.linspace(-1, 1, 100)
|
||||
|
||||
def test_legadd(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] += 1
|
||||
res = leg.legadd([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_legsub(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] -= 1
|
||||
res = leg.legsub([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_legmulx(self):
|
||||
assert_equal(leg.legmulx([0]), [0])
|
||||
assert_equal(leg.legmulx([1]), [0, 1])
|
||||
for i in range(1, 5):
|
||||
tmp = 2*i + 1
|
||||
ser = [0]*i + [1]
|
||||
tgt = [0]*(i - 1) + [i/tmp, 0, (i + 1)/tmp]
|
||||
assert_equal(leg.legmulx(ser), tgt)
|
||||
|
||||
def test_legmul(self):
|
||||
# check values of result
|
||||
for i in range(5):
|
||||
pol1 = [0]*i + [1]
|
||||
val1 = leg.legval(self.x, pol1)
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
pol2 = [0]*j + [1]
|
||||
val2 = leg.legval(self.x, pol2)
|
||||
pol3 = leg.legmul(pol1, pol2)
|
||||
val3 = leg.legval(self.x, pol3)
|
||||
assert_(len(pol3) == i + j + 1, msg)
|
||||
assert_almost_equal(val3, val1*val2, err_msg=msg)
|
||||
|
||||
def test_legdiv(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
ci = [0]*i + [1]
|
||||
cj = [0]*j + [1]
|
||||
tgt = leg.legadd(ci, cj)
|
||||
quo, rem = leg.legdiv(tgt, ci)
|
||||
res = leg.legadd(leg.legmul(quo, ci), rem)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_legpow(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
c = np.arange(i + 1)
|
||||
tgt = reduce(leg.legmul, [c]*j, np.array([1]))
|
||||
res = leg.legpow(c, j)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
|
||||
class TestEvaluation(object):
|
||||
# coefficients of 1 + 2*x + 3*x**2
|
||||
c1d = np.array([2., 2., 2.])
|
||||
c2d = np.einsum('i,j->ij', c1d, c1d)
|
||||
c3d = np.einsum('i,j,k->ijk', c1d, c1d, c1d)
|
||||
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
y = polyval(x, [1., 2., 3.])
|
||||
|
||||
def test_legval(self):
|
||||
#check empty input
|
||||
assert_equal(leg.legval([], [1]).size, 0)
|
||||
|
||||
#check normal input)
|
||||
x = np.linspace(-1, 1)
|
||||
y = [polyval(x, c) for c in Llist]
|
||||
for i in range(10):
|
||||
msg = "At i=%d" % i
|
||||
tgt = y[i]
|
||||
res = leg.legval(x, [0]*i + [1])
|
||||
assert_almost_equal(res, tgt, err_msg=msg)
|
||||
|
||||
#check that shape is preserved
|
||||
for i in range(3):
|
||||
dims = [2]*i
|
||||
x = np.zeros(dims)
|
||||
assert_equal(leg.legval(x, [1]).shape, dims)
|
||||
assert_equal(leg.legval(x, [1, 0]).shape, dims)
|
||||
assert_equal(leg.legval(x, [1, 0, 0]).shape, dims)
|
||||
|
||||
def test_legval2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, leg.legval2d, x1, x2[:2], self.c2d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2
|
||||
res = leg.legval2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = leg.legval2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_legval3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, leg.legval3d, x1, x2, x3[:2], self.c3d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2*y3
|
||||
res = leg.legval3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = leg.legval3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_leggrid2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j->ij', y1, y2)
|
||||
res = leg.leggrid2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = leg.leggrid2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3)*2)
|
||||
|
||||
def test_leggrid3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j,k->ijk', y1, y2, y3)
|
||||
res = leg.leggrid3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = leg.leggrid3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3)*3)
|
||||
|
||||
|
||||
class TestIntegral(object):
|
||||
|
||||
def test_legint(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, leg.legint, [0], .5)
|
||||
assert_raises(ValueError, leg.legint, [0], -1)
|
||||
assert_raises(ValueError, leg.legint, [0], 1, [0, 0])
|
||||
assert_raises(ValueError, leg.legint, [0], lbnd=[0])
|
||||
assert_raises(ValueError, leg.legint, [0], scl=[0])
|
||||
assert_raises(ValueError, leg.legint, [0], axis=.5)
|
||||
|
||||
# test integration of zero polynomial
|
||||
for i in range(2, 5):
|
||||
k = [0]*(i - 2) + [1]
|
||||
res = leg.legint([0], m=i, k=k)
|
||||
assert_almost_equal(res, [0, 1])
|
||||
|
||||
# check single integration with integration constant
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [1/scl]
|
||||
legpol = leg.poly2leg(pol)
|
||||
legint = leg.legint(legpol, m=1, k=[i])
|
||||
res = leg.leg2poly(legint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check single integration with integration constant and lbnd
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
legpol = leg.poly2leg(pol)
|
||||
legint = leg.legint(legpol, m=1, k=[i], lbnd=-1)
|
||||
assert_almost_equal(leg.legval(-1, legint), i)
|
||||
|
||||
# check single integration with integration constant and scaling
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [2/scl]
|
||||
legpol = leg.poly2leg(pol)
|
||||
legint = leg.legint(legpol, m=1, k=[i], scl=2)
|
||||
res = leg.leg2poly(legint)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with default k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = leg.legint(tgt, m=1)
|
||||
res = leg.legint(pol, m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with defined k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = leg.legint(tgt, m=1, k=[k])
|
||||
res = leg.legint(pol, m=j, k=list(range(j)))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with lbnd
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = leg.legint(tgt, m=1, k=[k], lbnd=-1)
|
||||
res = leg.legint(pol, m=j, k=list(range(j)), lbnd=-1)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = leg.legint(tgt, m=1, k=[k], scl=2)
|
||||
res = leg.legint(pol, m=j, k=list(range(j)), scl=2)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_legint_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([leg.legint(c) for c in c2d.T]).T
|
||||
res = leg.legint(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([leg.legint(c) for c in c2d])
|
||||
res = leg.legint(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([leg.legint(c, k=3) for c in c2d])
|
||||
res = leg.legint(c2d, k=3, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestDerivative(object):
|
||||
|
||||
def test_legder(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, leg.legder, [0], .5)
|
||||
assert_raises(ValueError, leg.legder, [0], -1)
|
||||
|
||||
# check that zeroth derivative does nothing
|
||||
for i in range(5):
|
||||
tgt = [0]*i + [1]
|
||||
res = leg.legder(tgt, m=0)
|
||||
assert_equal(trim(res), trim(tgt))
|
||||
|
||||
# check that derivation is the inverse of integration
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = leg.legder(leg.legint(tgt, m=j), m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check derivation with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = leg.legder(leg.legint(tgt, m=j, scl=2), m=j, scl=.5)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_legder_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([leg.legder(c) for c in c2d.T]).T
|
||||
res = leg.legder(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([leg.legder(c) for c in c2d])
|
||||
res = leg.legder(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestVander(object):
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
|
||||
def test_legvander(self):
|
||||
# check for 1d x
|
||||
x = np.arange(3)
|
||||
v = leg.legvander(x, 3)
|
||||
assert_(v.shape == (3, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], leg.legval(x, coef))
|
||||
|
||||
# check for 2d x
|
||||
x = np.array([[1, 2], [3, 4], [5, 6]])
|
||||
v = leg.legvander(x, 3)
|
||||
assert_(v.shape == (3, 2, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], leg.legval(x, coef))
|
||||
|
||||
def test_legvander2d(self):
|
||||
# also tests polyval2d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3))
|
||||
van = leg.legvander2d(x1, x2, [1, 2])
|
||||
tgt = leg.legval2d(x1, x2, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = leg.legvander2d([x1], [x2], [1, 2])
|
||||
assert_(van.shape == (1, 5, 6))
|
||||
|
||||
def test_legvander3d(self):
|
||||
# also tests polyval3d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3, 4))
|
||||
van = leg.legvander3d(x1, x2, x3, [1, 2, 3])
|
||||
tgt = leg.legval3d(x1, x2, x3, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = leg.legvander3d([x1], [x2], [x3], [1, 2, 3])
|
||||
assert_(van.shape == (1, 5, 24))
|
||||
|
||||
|
||||
class TestFitting(object):
|
||||
|
||||
def test_legfit(self):
|
||||
def f(x):
|
||||
return x*(x - 1)*(x - 2)
|
||||
|
||||
def f2(x):
|
||||
return x**4 + x**2 + 1
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, leg.legfit, [1], [1], -1)
|
||||
assert_raises(TypeError, leg.legfit, [[1]], [1], 0)
|
||||
assert_raises(TypeError, leg.legfit, [], [1], 0)
|
||||
assert_raises(TypeError, leg.legfit, [1], [[[1]]], 0)
|
||||
assert_raises(TypeError, leg.legfit, [1, 2], [1], 0)
|
||||
assert_raises(TypeError, leg.legfit, [1], [1, 2], 0)
|
||||
assert_raises(TypeError, leg.legfit, [1], [1], 0, w=[[1]])
|
||||
assert_raises(TypeError, leg.legfit, [1], [1], 0, w=[1, 1])
|
||||
assert_raises(ValueError, leg.legfit, [1], [1], [-1,])
|
||||
assert_raises(ValueError, leg.legfit, [1], [1], [2, -1, 6])
|
||||
assert_raises(TypeError, leg.legfit, [1], [1], [])
|
||||
|
||||
# Test fit
|
||||
x = np.linspace(0, 2)
|
||||
y = f(x)
|
||||
#
|
||||
coef3 = leg.legfit(x, y, 3)
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(leg.legval(x, coef3), y)
|
||||
coef3 = leg.legfit(x, y, [0, 1, 2, 3])
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(leg.legval(x, coef3), y)
|
||||
#
|
||||
coef4 = leg.legfit(x, y, 4)
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(leg.legval(x, coef4), y)
|
||||
coef4 = leg.legfit(x, y, [0, 1, 2, 3, 4])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(leg.legval(x, coef4), y)
|
||||
# check things still work if deg is not in strict increasing
|
||||
coef4 = leg.legfit(x, y, [2, 3, 4, 1, 0])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(leg.legval(x, coef4), y)
|
||||
#
|
||||
coef2d = leg.legfit(x, np.array([y, y]).T, 3)
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
coef2d = leg.legfit(x, np.array([y, y]).T, [0, 1, 2, 3])
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
# test weighting
|
||||
w = np.zeros_like(x)
|
||||
yw = y.copy()
|
||||
w[1::2] = 1
|
||||
y[0::2] = 0
|
||||
wcoef3 = leg.legfit(x, yw, 3, w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
wcoef3 = leg.legfit(x, yw, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
#
|
||||
wcoef2d = leg.legfit(x, np.array([yw, yw]).T, 3, w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
wcoef2d = leg.legfit(x, np.array([yw, yw]).T, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
# test scaling with complex values x points whose square
|
||||
# is zero when summed.
|
||||
x = [1, 1j, -1, -1j]
|
||||
assert_almost_equal(leg.legfit(x, x, 1), [0, 1])
|
||||
assert_almost_equal(leg.legfit(x, x, [0, 1]), [0, 1])
|
||||
# test fitting only even Legendre polynomials
|
||||
x = np.linspace(-1, 1)
|
||||
y = f2(x)
|
||||
coef1 = leg.legfit(x, y, 4)
|
||||
assert_almost_equal(leg.legval(x, coef1), y)
|
||||
coef2 = leg.legfit(x, y, [0, 2, 4])
|
||||
assert_almost_equal(leg.legval(x, coef2), y)
|
||||
assert_almost_equal(coef1, coef2)
|
||||
|
||||
|
||||
class TestCompanion(object):
|
||||
|
||||
def test_raises(self):
|
||||
assert_raises(ValueError, leg.legcompanion, [])
|
||||
assert_raises(ValueError, leg.legcompanion, [1])
|
||||
|
||||
def test_dimensions(self):
|
||||
for i in range(1, 5):
|
||||
coef = [0]*i + [1]
|
||||
assert_(leg.legcompanion(coef).shape == (i, i))
|
||||
|
||||
def test_linear_root(self):
|
||||
assert_(leg.legcompanion([1, 2])[0, 0] == -.5)
|
||||
|
||||
|
||||
class TestGauss(object):
|
||||
|
||||
def test_100(self):
|
||||
x, w = leg.leggauss(100)
|
||||
|
||||
# test orthogonality. Note that the results need to be normalized,
|
||||
# otherwise the huge values that can arise from fast growing
|
||||
# functions like Laguerre can be very confusing.
|
||||
v = leg.legvander(x, 99)
|
||||
vv = np.dot(v.T * w, v)
|
||||
vd = 1/np.sqrt(vv.diagonal())
|
||||
vv = vd[:, None] * vv * vd
|
||||
assert_almost_equal(vv, np.eye(100))
|
||||
|
||||
# check that the integral of 1 is correct
|
||||
tgt = 2.0
|
||||
assert_almost_equal(w.sum(), tgt)
|
||||
|
||||
|
||||
class TestMisc(object):
|
||||
|
||||
def test_legfromroots(self):
|
||||
res = leg.legfromroots([])
|
||||
assert_almost_equal(trim(res), [1])
|
||||
for i in range(1, 5):
|
||||
roots = np.cos(np.linspace(-np.pi, 0, 2*i + 1)[1::2])
|
||||
pol = leg.legfromroots(roots)
|
||||
res = leg.legval(roots, pol)
|
||||
tgt = 0
|
||||
assert_(len(pol) == i + 1)
|
||||
assert_almost_equal(leg.leg2poly(pol)[-1], 1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
def test_legroots(self):
|
||||
assert_almost_equal(leg.legroots([1]), [])
|
||||
assert_almost_equal(leg.legroots([1, 2]), [-.5])
|
||||
for i in range(2, 5):
|
||||
tgt = np.linspace(-1, 1, i)
|
||||
res = leg.legroots(leg.legfromroots(tgt))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_legtrim(self):
|
||||
coef = [2, -1, 1, 0]
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, leg.legtrim, coef, -1)
|
||||
|
||||
# Test results
|
||||
assert_equal(leg.legtrim(coef), coef[:-1])
|
||||
assert_equal(leg.legtrim(coef, 1), coef[:-3])
|
||||
assert_equal(leg.legtrim(coef, 2), [0])
|
||||
|
||||
def test_legline(self):
|
||||
assert_equal(leg.legline(3, 4), [3, 4])
|
||||
|
||||
def test_leg2poly(self):
|
||||
for i in range(10):
|
||||
assert_almost_equal(leg.leg2poly([0]*i + [1]), Llist[i])
|
||||
|
||||
def test_poly2leg(self):
|
||||
for i in range(10):
|
||||
assert_almost_equal(leg.poly2leg(Llist[i]), [0]*i + [1])
|
||||
|
||||
def test_weight(self):
|
||||
x = np.linspace(-1, 1, 11)
|
||||
tgt = 1.
|
||||
res = leg.legweight(x)
|
||||
assert_almost_equal(res, tgt)
|
||||
@@ -0,0 +1,578 @@
|
||||
"""Tests for polynomial module.
|
||||
|
||||
"""
|
||||
from __future__ import division, absolute_import, print_function
|
||||
|
||||
from functools import reduce
|
||||
|
||||
import numpy as np
|
||||
import numpy.polynomial.polynomial as poly
|
||||
from numpy.testing import (
|
||||
assert_almost_equal, assert_raises, assert_equal, assert_,
|
||||
)
|
||||
|
||||
|
||||
def trim(x):
|
||||
return poly.polytrim(x, tol=1e-6)
|
||||
|
||||
T0 = [1]
|
||||
T1 = [0, 1]
|
||||
T2 = [-1, 0, 2]
|
||||
T3 = [0, -3, 0, 4]
|
||||
T4 = [1, 0, -8, 0, 8]
|
||||
T5 = [0, 5, 0, -20, 0, 16]
|
||||
T6 = [-1, 0, 18, 0, -48, 0, 32]
|
||||
T7 = [0, -7, 0, 56, 0, -112, 0, 64]
|
||||
T8 = [1, 0, -32, 0, 160, 0, -256, 0, 128]
|
||||
T9 = [0, 9, 0, -120, 0, 432, 0, -576, 0, 256]
|
||||
|
||||
Tlist = [T0, T1, T2, T3, T4, T5, T6, T7, T8, T9]
|
||||
|
||||
|
||||
class TestConstants(object):
|
||||
|
||||
def test_polydomain(self):
|
||||
assert_equal(poly.polydomain, [-1, 1])
|
||||
|
||||
def test_polyzero(self):
|
||||
assert_equal(poly.polyzero, [0])
|
||||
|
||||
def test_polyone(self):
|
||||
assert_equal(poly.polyone, [1])
|
||||
|
||||
def test_polyx(self):
|
||||
assert_equal(poly.polyx, [0, 1])
|
||||
|
||||
|
||||
class TestArithmetic(object):
|
||||
|
||||
def test_polyadd(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] += 1
|
||||
res = poly.polyadd([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_polysub(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(max(i, j) + 1)
|
||||
tgt[i] += 1
|
||||
tgt[j] -= 1
|
||||
res = poly.polysub([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_polymulx(self):
|
||||
assert_equal(poly.polymulx([0]), [0])
|
||||
assert_equal(poly.polymulx([1]), [0, 1])
|
||||
for i in range(1, 5):
|
||||
ser = [0]*i + [1]
|
||||
tgt = [0]*(i + 1) + [1]
|
||||
assert_equal(poly.polymulx(ser), tgt)
|
||||
|
||||
def test_polymul(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
tgt = np.zeros(i + j + 1)
|
||||
tgt[i + j] += 1
|
||||
res = poly.polymul([0]*i + [1], [0]*j + [1])
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
def test_polydiv(self):
|
||||
# check zero division
|
||||
assert_raises(ZeroDivisionError, poly.polydiv, [1], [0])
|
||||
|
||||
# check scalar division
|
||||
quo, rem = poly.polydiv([2], [2])
|
||||
assert_equal((quo, rem), (1, 0))
|
||||
quo, rem = poly.polydiv([2, 2], [2])
|
||||
assert_equal((quo, rem), ((1, 1), 0))
|
||||
|
||||
# check rest.
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
ci = [0]*i + [1, 2]
|
||||
cj = [0]*j + [1, 2]
|
||||
tgt = poly.polyadd(ci, cj)
|
||||
quo, rem = poly.polydiv(tgt, ci)
|
||||
res = poly.polyadd(poly.polymul(quo, ci), rem)
|
||||
assert_equal(res, tgt, err_msg=msg)
|
||||
|
||||
def test_polypow(self):
|
||||
for i in range(5):
|
||||
for j in range(5):
|
||||
msg = "At i=%d, j=%d" % (i, j)
|
||||
c = np.arange(i + 1)
|
||||
tgt = reduce(poly.polymul, [c]*j, np.array([1]))
|
||||
res = poly.polypow(c, j)
|
||||
assert_equal(trim(res), trim(tgt), err_msg=msg)
|
||||
|
||||
|
||||
class TestEvaluation(object):
|
||||
# coefficients of 1 + 2*x + 3*x**2
|
||||
c1d = np.array([1., 2., 3.])
|
||||
c2d = np.einsum('i,j->ij', c1d, c1d)
|
||||
c3d = np.einsum('i,j,k->ijk', c1d, c1d, c1d)
|
||||
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
y = poly.polyval(x, [1., 2., 3.])
|
||||
|
||||
def test_polyval(self):
|
||||
#check empty input
|
||||
assert_equal(poly.polyval([], [1]).size, 0)
|
||||
|
||||
#check normal input)
|
||||
x = np.linspace(-1, 1)
|
||||
y = [x**i for i in range(5)]
|
||||
for i in range(5):
|
||||
tgt = y[i]
|
||||
res = poly.polyval(x, [0]*i + [1])
|
||||
assert_almost_equal(res, tgt)
|
||||
tgt = x*(x**2 - 1)
|
||||
res = poly.polyval(x, [0, -1, 0, 1])
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#check that shape is preserved
|
||||
for i in range(3):
|
||||
dims = [2]*i
|
||||
x = np.zeros(dims)
|
||||
assert_equal(poly.polyval(x, [1]).shape, dims)
|
||||
assert_equal(poly.polyval(x, [1, 0]).shape, dims)
|
||||
assert_equal(poly.polyval(x, [1, 0, 0]).shape, dims)
|
||||
|
||||
def test_polyvalfromroots(self):
|
||||
# check exception for broadcasting x values over root array with
|
||||
# too few dimensions
|
||||
assert_raises(ValueError, poly.polyvalfromroots,
|
||||
[1], [1], tensor=False)
|
||||
|
||||
# check empty input
|
||||
assert_equal(poly.polyvalfromroots([], [1]).size, 0)
|
||||
assert_(poly.polyvalfromroots([], [1]).shape == (0,))
|
||||
|
||||
# check empty input + multidimensional roots
|
||||
assert_equal(poly.polyvalfromroots([], [[1] * 5]).size, 0)
|
||||
assert_(poly.polyvalfromroots([], [[1] * 5]).shape == (5, 0))
|
||||
|
||||
# check scalar input
|
||||
assert_equal(poly.polyvalfromroots(1, 1), 0)
|
||||
assert_(poly.polyvalfromroots(1, np.ones((3, 3))).shape == (3,))
|
||||
|
||||
# check normal input)
|
||||
x = np.linspace(-1, 1)
|
||||
y = [x**i for i in range(5)]
|
||||
for i in range(1, 5):
|
||||
tgt = y[i]
|
||||
res = poly.polyvalfromroots(x, [0]*i)
|
||||
assert_almost_equal(res, tgt)
|
||||
tgt = x*(x - 1)*(x + 1)
|
||||
res = poly.polyvalfromroots(x, [-1, 0, 1])
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check that shape is preserved
|
||||
for i in range(3):
|
||||
dims = [2]*i
|
||||
x = np.zeros(dims)
|
||||
assert_equal(poly.polyvalfromroots(x, [1]).shape, dims)
|
||||
assert_equal(poly.polyvalfromroots(x, [1, 0]).shape, dims)
|
||||
assert_equal(poly.polyvalfromroots(x, [1, 0, 0]).shape, dims)
|
||||
|
||||
# check compatibility with factorization
|
||||
ptest = [15, 2, -16, -2, 1]
|
||||
r = poly.polyroots(ptest)
|
||||
x = np.linspace(-1, 1)
|
||||
assert_almost_equal(poly.polyval(x, ptest),
|
||||
poly.polyvalfromroots(x, r))
|
||||
|
||||
# check multidimensional arrays of roots and values
|
||||
# check tensor=False
|
||||
rshape = (3, 5)
|
||||
x = np.arange(-3, 2)
|
||||
r = np.random.randint(-5, 5, size=rshape)
|
||||
res = poly.polyvalfromroots(x, r, tensor=False)
|
||||
tgt = np.empty(r.shape[1:])
|
||||
for ii in range(tgt.size):
|
||||
tgt[ii] = poly.polyvalfromroots(x[ii], r[:, ii])
|
||||
assert_equal(res, tgt)
|
||||
|
||||
# check tensor=True
|
||||
x = np.vstack([x, 2*x])
|
||||
res = poly.polyvalfromroots(x, r, tensor=True)
|
||||
tgt = np.empty(r.shape[1:] + x.shape)
|
||||
for ii in range(r.shape[1]):
|
||||
for jj in range(x.shape[0]):
|
||||
tgt[ii, jj, :] = poly.polyvalfromroots(x[jj], r[:, ii])
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_polyval2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, poly.polyval2d, x1, x2[:2], self.c2d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2
|
||||
res = poly.polyval2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = poly.polyval2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_polyval3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test exceptions
|
||||
assert_raises(ValueError, poly.polyval3d, x1, x2, x3[:2], self.c3d)
|
||||
|
||||
#test values
|
||||
tgt = y1*y2*y3
|
||||
res = poly.polyval3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = poly.polyval3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3))
|
||||
|
||||
def test_polygrid2d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j->ij', y1, y2)
|
||||
res = poly.polygrid2d(x1, x2, self.c2d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = poly.polygrid2d(z, z, self.c2d)
|
||||
assert_(res.shape == (2, 3)*2)
|
||||
|
||||
def test_polygrid3d(self):
|
||||
x1, x2, x3 = self.x
|
||||
y1, y2, y3 = self.y
|
||||
|
||||
#test values
|
||||
tgt = np.einsum('i,j,k->ijk', y1, y2, y3)
|
||||
res = poly.polygrid3d(x1, x2, x3, self.c3d)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
#test shape
|
||||
z = np.ones((2, 3))
|
||||
res = poly.polygrid3d(z, z, z, self.c3d)
|
||||
assert_(res.shape == (2, 3)*3)
|
||||
|
||||
|
||||
class TestIntegral(object):
|
||||
|
||||
def test_polyint(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, poly.polyint, [0], .5)
|
||||
assert_raises(ValueError, poly.polyint, [0], -1)
|
||||
assert_raises(ValueError, poly.polyint, [0], 1, [0, 0])
|
||||
assert_raises(ValueError, poly.polyint, [0], lbnd=[0])
|
||||
assert_raises(ValueError, poly.polyint, [0], scl=[0])
|
||||
assert_raises(ValueError, poly.polyint, [0], axis=.5)
|
||||
|
||||
# test integration of zero polynomial
|
||||
for i in range(2, 5):
|
||||
k = [0]*(i - 2) + [1]
|
||||
res = poly.polyint([0], m=i, k=k)
|
||||
assert_almost_equal(res, [0, 1])
|
||||
|
||||
# check single integration with integration constant
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [1/scl]
|
||||
res = poly.polyint(pol, m=1, k=[i])
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check single integration with integration constant and lbnd
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
res = poly.polyint(pol, m=1, k=[i], lbnd=-1)
|
||||
assert_almost_equal(poly.polyval(-1, res), i)
|
||||
|
||||
# check single integration with integration constant and scaling
|
||||
for i in range(5):
|
||||
scl = i + 1
|
||||
pol = [0]*i + [1]
|
||||
tgt = [i] + [0]*i + [2/scl]
|
||||
res = poly.polyint(pol, m=1, k=[i], scl=2)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with default k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = poly.polyint(tgt, m=1)
|
||||
res = poly.polyint(pol, m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with defined k
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = poly.polyint(tgt, m=1, k=[k])
|
||||
res = poly.polyint(pol, m=j, k=list(range(j)))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with lbnd
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = poly.polyint(tgt, m=1, k=[k], lbnd=-1)
|
||||
res = poly.polyint(pol, m=j, k=list(range(j)), lbnd=-1)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check multiple integrations with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
pol = [0]*i + [1]
|
||||
tgt = pol[:]
|
||||
for k in range(j):
|
||||
tgt = poly.polyint(tgt, m=1, k=[k], scl=2)
|
||||
res = poly.polyint(pol, m=j, k=list(range(j)), scl=2)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_polyint_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([poly.polyint(c) for c in c2d.T]).T
|
||||
res = poly.polyint(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([poly.polyint(c) for c in c2d])
|
||||
res = poly.polyint(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([poly.polyint(c, k=3) for c in c2d])
|
||||
res = poly.polyint(c2d, k=3, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestDerivative(object):
|
||||
|
||||
def test_polyder(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, poly.polyder, [0], .5)
|
||||
assert_raises(ValueError, poly.polyder, [0], -1)
|
||||
|
||||
# check that zeroth derivative does nothing
|
||||
for i in range(5):
|
||||
tgt = [0]*i + [1]
|
||||
res = poly.polyder(tgt, m=0)
|
||||
assert_equal(trim(res), trim(tgt))
|
||||
|
||||
# check that derivation is the inverse of integration
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = poly.polyder(poly.polyint(tgt, m=j), m=j)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
# check derivation with scaling
|
||||
for i in range(5):
|
||||
for j in range(2, 5):
|
||||
tgt = [0]*i + [1]
|
||||
res = poly.polyder(poly.polyint(tgt, m=j, scl=2), m=j, scl=.5)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_polyder_axis(self):
|
||||
# check that axis keyword works
|
||||
c2d = np.random.random((3, 4))
|
||||
|
||||
tgt = np.vstack([poly.polyder(c) for c in c2d.T]).T
|
||||
res = poly.polyder(c2d, axis=0)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
tgt = np.vstack([poly.polyder(c) for c in c2d])
|
||||
res = poly.polyder(c2d, axis=1)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
|
||||
class TestVander(object):
|
||||
# some random values in [-1, 1)
|
||||
x = np.random.random((3, 5))*2 - 1
|
||||
|
||||
def test_polyvander(self):
|
||||
# check for 1d x
|
||||
x = np.arange(3)
|
||||
v = poly.polyvander(x, 3)
|
||||
assert_(v.shape == (3, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], poly.polyval(x, coef))
|
||||
|
||||
# check for 2d x
|
||||
x = np.array([[1, 2], [3, 4], [5, 6]])
|
||||
v = poly.polyvander(x, 3)
|
||||
assert_(v.shape == (3, 2, 4))
|
||||
for i in range(4):
|
||||
coef = [0]*i + [1]
|
||||
assert_almost_equal(v[..., i], poly.polyval(x, coef))
|
||||
|
||||
def test_polyvander2d(self):
|
||||
# also tests polyval2d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3))
|
||||
van = poly.polyvander2d(x1, x2, [1, 2])
|
||||
tgt = poly.polyval2d(x1, x2, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = poly.polyvander2d([x1], [x2], [1, 2])
|
||||
assert_(van.shape == (1, 5, 6))
|
||||
|
||||
def test_polyvander3d(self):
|
||||
# also tests polyval3d for non-square coefficient array
|
||||
x1, x2, x3 = self.x
|
||||
c = np.random.random((2, 3, 4))
|
||||
van = poly.polyvander3d(x1, x2, x3, [1, 2, 3])
|
||||
tgt = poly.polyval3d(x1, x2, x3, c)
|
||||
res = np.dot(van, c.flat)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# check shape
|
||||
van = poly.polyvander3d([x1], [x2], [x3], [1, 2, 3])
|
||||
assert_(van.shape == (1, 5, 24))
|
||||
|
||||
|
||||
class TestCompanion(object):
|
||||
|
||||
def test_raises(self):
|
||||
assert_raises(ValueError, poly.polycompanion, [])
|
||||
assert_raises(ValueError, poly.polycompanion, [1])
|
||||
|
||||
def test_dimensions(self):
|
||||
for i in range(1, 5):
|
||||
coef = [0]*i + [1]
|
||||
assert_(poly.polycompanion(coef).shape == (i, i))
|
||||
|
||||
def test_linear_root(self):
|
||||
assert_(poly.polycompanion([1, 2])[0, 0] == -.5)
|
||||
|
||||
|
||||
class TestMisc(object):
|
||||
|
||||
def test_polyfromroots(self):
|
||||
res = poly.polyfromroots([])
|
||||
assert_almost_equal(trim(res), [1])
|
||||
for i in range(1, 5):
|
||||
roots = np.cos(np.linspace(-np.pi, 0, 2*i + 1)[1::2])
|
||||
tgt = Tlist[i]
|
||||
res = poly.polyfromroots(roots)*2**(i-1)
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_polyroots(self):
|
||||
assert_almost_equal(poly.polyroots([1]), [])
|
||||
assert_almost_equal(poly.polyroots([1, 2]), [-.5])
|
||||
for i in range(2, 5):
|
||||
tgt = np.linspace(-1, 1, i)
|
||||
res = poly.polyroots(poly.polyfromroots(tgt))
|
||||
assert_almost_equal(trim(res), trim(tgt))
|
||||
|
||||
def test_polyfit(self):
|
||||
def f(x):
|
||||
return x*(x - 1)*(x - 2)
|
||||
|
||||
def f2(x):
|
||||
return x**4 + x**2 + 1
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, poly.polyfit, [1], [1], -1)
|
||||
assert_raises(TypeError, poly.polyfit, [[1]], [1], 0)
|
||||
assert_raises(TypeError, poly.polyfit, [], [1], 0)
|
||||
assert_raises(TypeError, poly.polyfit, [1], [[[1]]], 0)
|
||||
assert_raises(TypeError, poly.polyfit, [1, 2], [1], 0)
|
||||
assert_raises(TypeError, poly.polyfit, [1], [1, 2], 0)
|
||||
assert_raises(TypeError, poly.polyfit, [1], [1], 0, w=[[1]])
|
||||
assert_raises(TypeError, poly.polyfit, [1], [1], 0, w=[1, 1])
|
||||
assert_raises(ValueError, poly.polyfit, [1], [1], [-1,])
|
||||
assert_raises(ValueError, poly.polyfit, [1], [1], [2, -1, 6])
|
||||
assert_raises(TypeError, poly.polyfit, [1], [1], [])
|
||||
|
||||
# Test fit
|
||||
x = np.linspace(0, 2)
|
||||
y = f(x)
|
||||
#
|
||||
coef3 = poly.polyfit(x, y, 3)
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(poly.polyval(x, coef3), y)
|
||||
coef3 = poly.polyfit(x, y, [0, 1, 2, 3])
|
||||
assert_equal(len(coef3), 4)
|
||||
assert_almost_equal(poly.polyval(x, coef3), y)
|
||||
#
|
||||
coef4 = poly.polyfit(x, y, 4)
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(poly.polyval(x, coef4), y)
|
||||
coef4 = poly.polyfit(x, y, [0, 1, 2, 3, 4])
|
||||
assert_equal(len(coef4), 5)
|
||||
assert_almost_equal(poly.polyval(x, coef4), y)
|
||||
#
|
||||
coef2d = poly.polyfit(x, np.array([y, y]).T, 3)
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
coef2d = poly.polyfit(x, np.array([y, y]).T, [0, 1, 2, 3])
|
||||
assert_almost_equal(coef2d, np.array([coef3, coef3]).T)
|
||||
# test weighting
|
||||
w = np.zeros_like(x)
|
||||
yw = y.copy()
|
||||
w[1::2] = 1
|
||||
yw[0::2] = 0
|
||||
wcoef3 = poly.polyfit(x, yw, 3, w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
wcoef3 = poly.polyfit(x, yw, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef3, coef3)
|
||||
#
|
||||
wcoef2d = poly.polyfit(x, np.array([yw, yw]).T, 3, w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
wcoef2d = poly.polyfit(x, np.array([yw, yw]).T, [0, 1, 2, 3], w=w)
|
||||
assert_almost_equal(wcoef2d, np.array([coef3, coef3]).T)
|
||||
# test scaling with complex values x points whose square
|
||||
# is zero when summed.
|
||||
x = [1, 1j, -1, -1j]
|
||||
assert_almost_equal(poly.polyfit(x, x, 1), [0, 1])
|
||||
assert_almost_equal(poly.polyfit(x, x, [0, 1]), [0, 1])
|
||||
# test fitting only even Polyendre polynomials
|
||||
x = np.linspace(-1, 1)
|
||||
y = f2(x)
|
||||
coef1 = poly.polyfit(x, y, 4)
|
||||
assert_almost_equal(poly.polyval(x, coef1), y)
|
||||
coef2 = poly.polyfit(x, y, [0, 2, 4])
|
||||
assert_almost_equal(poly.polyval(x, coef2), y)
|
||||
assert_almost_equal(coef1, coef2)
|
||||
|
||||
def test_polytrim(self):
|
||||
coef = [2, -1, 1, 0]
|
||||
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, poly.polytrim, coef, -1)
|
||||
|
||||
# Test results
|
||||
assert_equal(poly.polytrim(coef), coef[:-1])
|
||||
assert_equal(poly.polytrim(coef, 1), coef[:-3])
|
||||
assert_equal(poly.polytrim(coef, 2), [0])
|
||||
|
||||
def test_polyline(self):
|
||||
assert_equal(poly.polyline(3, 4), [3, 4])
|
||||
@@ -0,0 +1,108 @@
|
||||
"""Tests for polyutils module.
|
||||
|
||||
"""
|
||||
from __future__ import division, absolute_import, print_function
|
||||
|
||||
import numpy as np
|
||||
import numpy.polynomial.polyutils as pu
|
||||
from numpy.testing import (
|
||||
assert_almost_equal, assert_raises, assert_equal, assert_,
|
||||
)
|
||||
|
||||
|
||||
class TestMisc(object):
|
||||
|
||||
def test_trimseq(self):
|
||||
for i in range(5):
|
||||
tgt = [1]
|
||||
res = pu.trimseq([1] + [0]*5)
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_as_series(self):
|
||||
# check exceptions
|
||||
assert_raises(ValueError, pu.as_series, [[]])
|
||||
assert_raises(ValueError, pu.as_series, [[[1, 2]]])
|
||||
assert_raises(ValueError, pu.as_series, [[1], ['a']])
|
||||
# check common types
|
||||
types = ['i', 'd', 'O']
|
||||
for i in range(len(types)):
|
||||
for j in range(i):
|
||||
ci = np.ones(1, types[i])
|
||||
cj = np.ones(1, types[j])
|
||||
[resi, resj] = pu.as_series([ci, cj])
|
||||
assert_(resi.dtype.char == resj.dtype.char)
|
||||
assert_(resj.dtype.char == types[i])
|
||||
|
||||
def test_trimcoef(self):
|
||||
coef = [2, -1, 1, 0]
|
||||
# Test exceptions
|
||||
assert_raises(ValueError, pu.trimcoef, coef, -1)
|
||||
# Test results
|
||||
assert_equal(pu.trimcoef(coef), coef[:-1])
|
||||
assert_equal(pu.trimcoef(coef, 1), coef[:-3])
|
||||
assert_equal(pu.trimcoef(coef, 2), [0])
|
||||
|
||||
|
||||
class TestDomain(object):
|
||||
|
||||
def test_getdomain(self):
|
||||
# test for real values
|
||||
x = [1, 10, 3, -1]
|
||||
tgt = [-1, 10]
|
||||
res = pu.getdomain(x)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# test for complex values
|
||||
x = [1 + 1j, 1 - 1j, 0, 2]
|
||||
tgt = [-1j, 2 + 1j]
|
||||
res = pu.getdomain(x)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
def test_mapdomain(self):
|
||||
# test for real values
|
||||
dom1 = [0, 4]
|
||||
dom2 = [1, 3]
|
||||
tgt = dom2
|
||||
res = pu.mapdomain(dom1, dom1, dom2)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# test for complex values
|
||||
dom1 = [0 - 1j, 2 + 1j]
|
||||
dom2 = [-2, 2]
|
||||
tgt = dom2
|
||||
x = dom1
|
||||
res = pu.mapdomain(x, dom1, dom2)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# test for multidimensional arrays
|
||||
dom1 = [0, 4]
|
||||
dom2 = [1, 3]
|
||||
tgt = np.array([dom2, dom2])
|
||||
x = np.array([dom1, dom1])
|
||||
res = pu.mapdomain(x, dom1, dom2)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# test that subtypes are preserved.
|
||||
class MyNDArray(np.ndarray):
|
||||
pass
|
||||
|
||||
dom1 = [0, 4]
|
||||
dom2 = [1, 3]
|
||||
x = np.array([dom1, dom1]).view(MyNDArray)
|
||||
res = pu.mapdomain(x, dom1, dom2)
|
||||
assert_(isinstance(res, MyNDArray))
|
||||
|
||||
def test_mapparms(self):
|
||||
# test for real values
|
||||
dom1 = [0, 4]
|
||||
dom2 = [1, 3]
|
||||
tgt = [1, .5]
|
||||
res = pu. mapparms(dom1, dom2)
|
||||
assert_almost_equal(res, tgt)
|
||||
|
||||
# test for complex values
|
||||
dom1 = [0 - 1j, 2 + 1j]
|
||||
dom2 = [-2, 2]
|
||||
tgt = [-1 + 1j, 1 - 1j]
|
||||
res = pu.mapparms(dom1, dom2)
|
||||
assert_almost_equal(res, tgt)
|
||||
@@ -0,0 +1,68 @@
|
||||
from __future__ import division, absolute_import, print_function
|
||||
|
||||
import numpy.polynomial as poly
|
||||
from numpy.testing import assert_equal
|
||||
|
||||
|
||||
class TestStr(object):
|
||||
def test_polynomial_str(self):
|
||||
res = str(poly.Polynomial([0, 1]))
|
||||
tgt = 'poly([0. 1.])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_chebyshev_str(self):
|
||||
res = str(poly.Chebyshev([0, 1]))
|
||||
tgt = 'cheb([0. 1.])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_legendre_str(self):
|
||||
res = str(poly.Legendre([0, 1]))
|
||||
tgt = 'leg([0. 1.])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_hermite_str(self):
|
||||
res = str(poly.Hermite([0, 1]))
|
||||
tgt = 'herm([0. 1.])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_hermiteE_str(self):
|
||||
res = str(poly.HermiteE([0, 1]))
|
||||
tgt = 'herme([0. 1.])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_laguerre_str(self):
|
||||
res = str(poly.Laguerre([0, 1]))
|
||||
tgt = 'lag([0. 1.])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
|
||||
class TestRepr(object):
|
||||
def test_polynomial_str(self):
|
||||
res = repr(poly.Polynomial([0, 1]))
|
||||
tgt = 'Polynomial([0., 1.], domain=[-1, 1], window=[-1, 1])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_chebyshev_str(self):
|
||||
res = repr(poly.Chebyshev([0, 1]))
|
||||
tgt = 'Chebyshev([0., 1.], domain=[-1, 1], window=[-1, 1])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_legendre_repr(self):
|
||||
res = repr(poly.Legendre([0, 1]))
|
||||
tgt = 'Legendre([0., 1.], domain=[-1, 1], window=[-1, 1])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_hermite_repr(self):
|
||||
res = repr(poly.Hermite([0, 1]))
|
||||
tgt = 'Hermite([0., 1.], domain=[-1, 1], window=[-1, 1])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_hermiteE_repr(self):
|
||||
res = repr(poly.HermiteE([0, 1]))
|
||||
tgt = 'HermiteE([0., 1.], domain=[-1, 1], window=[-1, 1])'
|
||||
assert_equal(res, tgt)
|
||||
|
||||
def test_laguerre_repr(self):
|
||||
res = repr(poly.Laguerre([0, 1]))
|
||||
tgt = 'Laguerre([0., 1.], domain=[0, 1], window=[0, 1])'
|
||||
assert_equal(res, tgt)
|
||||
Reference in New Issue
Block a user